AT4G32490.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:extracellular 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : early nodulin-like protein 4 | ||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
early nodulin-like protein 4 (ENODL4); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 3 (TAIR:AT4G28365.1); Has 2784 Blast hits to 1902 proteins in 202 species: Archae - 4; Bacteria - 437; Metazoa - 154; Fungi - 144; Plants - 1454; Viruses - 202; Other Eukaryotes - 389 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr4:-:15678811..15679556 | ||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 23659.50 Da | ||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 8.69 | ||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.04 | ||||||||||||||||||||||||||||||||||||||||
Length | 221 amino acids | ||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MVFVKMTDVY LMIVMLMGLG FSIELSNGHK FYVGGRDGWV LTPSEDYSHW SHRNRFQVND TLYFKYVKGK DSVLEVSEKE YNTCNTTHPL TSLSDGDSLF 101: LLSRSDPFFF VSGNSGSCLK GQKLAVTVMS TGHHSHTPRH PSPSPSPSAS PVRKALLSPA PIPVHKALSS PAPTPGVDPS HSEVLAPAPG PAAAVRNLAG 201: SVAPGVISLG LVLVIMISSM V |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)