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AT4G30920.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31932409 (2020): plastid
  • PMID:31911558 (2020): mitochondrion
  • PMID:31871212 (2020): mitochondrion
  • PMID:31818904 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:31186290 (2019): plastid plastid stroma
  • PMID:31023727 (2019): mitochondrion
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30447334 (2019): plasma membrane
  • PMID:30135097 (2018): plastid
  • PMID:29967049 (2018): plastid
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:24872594 (2014): plastid plastid stroma
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22550958 (2012): plastid
  • PMID:21531424 (2011): plastid
  • PMID:21311031 (2011): mitochondrion
  • PMID:21166475 (2011): cytosol
  • PMID:20423899 (2010): plastid
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:19334764 (2009): plasma membrane
  • PMID:18998720 (2009): extracellular region
  • PMID:18431481 (2008): plastid
  • PMID:15215502 (2004): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Cytosol aminopeptidase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cytosol aminopeptidase family protein; FUNCTIONS IN: manganese ion binding, metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis, protein metabolic process; LOCATED IN: chloroplast, vacuole; EXPRESSED IN: guard cell, cultured cell; CONTAINS InterPro DOMAIN/s: Peptidase M17, leucyl aminopeptidase, C-terminal (InterPro:IPR000819), Peptidase M17, leucyl aminopeptidase, N-terminal (InterPro:IPR008283), Peptidase M17, leucyl aminopeptidase (InterPro:IPR011356); BEST Arabidopsis thaliana protein match is: Cytosol aminopeptidase family protein (TAIR:AT4G30910.1); Has 9817 Blast hits to 9813 proteins in 2024 species: Archae - 18; Bacteria - 5432; Metazoa - 663; Fungi - 36; Plants - 122; Viruses - 1; Other Eukaryotes - 3545 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G30920-MONOMEREC:3.4.11.1EC:3.4.11.5eggNOG:COG0260
eggNOG:KOG2597EMBL:AF424634EMBL:AL022198EMBL:AL161577
EMBL:BT002652EMBL:CP002687EnsemblPlants:AT4G30920EnsemblPlants:AT4G30920.1
entrez:829216GeneID:829216Genevisible:Q944P7GO:GO:0004177
GO:GO:0005773GO:GO:0005829GO:GO:0008235GO:GO:0009507
GO:GO:0009570GO:GO:0010150GO:GO:0030145Gramene:AT4G30920.1
HAMAP:MF_00181hmmpanther:PTHR11963hmmpanther:PTHR11963:SF17HOGENOM:HOG000243129
InParanoid:Q944P7InterPro:IPR000819InterPro:IPR008283InterPro:IPR011356
InterPro:IPR023042KEGG:ath:AT4G30920KO:K01255MEROPS:M17.A01
OMA:ANGMELTPaxDb:Q944P7Pfam:PF00883Pfam:PF02789
Pfam:Q944P7PhylomeDB:Q944P7PIR:A85362PRIDE:Q944P7
PRINTS:PR00481PRO:PR:Q944P7PROSITE:PS00631ProteinModelPortal:Q944P7
Proteomes:UP000006548RefSeq:NP_194821.1scanprosite:PS00631SMR:Q944P7
STRING:3702.AT4G30920.1SUPFAM:SSF52949SUPFAM:SSF53187TAIR:AT4G30920
UniGene:At.2156UniProt:Q944P7
Coordinates (TAIR10) chr4:-:15046589..15049304
Molecular Weight (calculated) 61310.50 Da
IEP (calculated) 7.09
GRAVY (calculated) 0.06
Length 583 amino acids
Sequence (TAIR10)
(BLAST)
001: MAVTLVTSFA SSSSRFHFRS FSSSPSSLSS CFVRFQFPSR LRLAFAVTPL YSSSRAMAHT ISHATLGLTQ ANSVDHPKIS FSGKEIDVTE WKGDILAVGV
101: TEKDMAKDVN SKFENPILKK LDAHLGGLLA DVSSEEDFSG KPGQSTVLRL PGLGSKRVGL IGLGKSASTP SAFQSLGEAV AAAAKASQAS SVAVVLASSE
201: SVSNESKLCS ASAIASGTVL GLFEDSRYKS ESKKPSLKSV DIIGFGSGPE LEKKLKYAEH VSYGVIFGKE LVNSPANVLT PAVLAEEALN LASMYSDVMT
301: ANILNEEQCK ELKMGSYLAV AAASANPPHF IHLIYKPSSG PVKTKLALVG KGLTFDSGGY NIKTGPGCLI ELMKFDMGGS AAVLGAAKAI GQIKPPGVEV
401: HFIVAACENM ISGTGMRPGD VLTASNGKTI EVNNTDAEGR LTLADALVYA CNQGVDKVVD LATLTGACII ALGTSMAGIY TPSDKLAKEV IAASERSGEK
501: LWRMPMEESY WEMMKSGVAD MVNTGGRAGG SITAALFLKQ FVSEDVEWMH IDMAGPVWNE KKKAATGFGV ATLVEWVQNH SSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)