AT4G25390.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G51770.1); Has 91751 Blast hits to 74768 proteins in 2369 species: Archae - 62; Bacteria - 7643; Metazoa - 25610; Fungi - 5037; Plants - 44627; Viruses - 173; Other Eukaryotes - 8599 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr4:+:12977491..12979446 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 72244.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 9.80 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.46 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 651 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MPSRSISAPV PVLAPAPIVS SLVPAAPSGH QNKTTRIFPP FVVAGAGAGF SLFITLSVCF CKFSRKRSSP PAENASSSPR RPSPREFSYS SLRRATGSFS 101: QANRLGQGGF GVVFRGTISG GENVAVKVMD SGSLQGEGEF QNELFFAAKL DSPHVVPVIG FSHDRKRRRL LLVYKLMDNG NLQDALLHRR CPELMDWNRR 201: FLVAVNIADG IKHLHSLEPP VIHGDIKPSN VLLDSLFSAK IADFGLARLK AEQVEISVAP ERDGDGSMVE EVESVVTTVT GYEDFNFGLV DQSPESVAKV 301: PGSVSASPEA TTVVSVSPEM GEKTDEDGGS VVVMKKGKES ESKDWWWKQE SNVERGRVKE YVMQWIGSEV KKERPSRSDW IEAAALSSSS SKKLEKKTSK 401: RLDWWLSLEE EDENKKKKKR RMVREWWKDE YRRELAKKRK KKKKMTLEAE FCSDDGSSSV SQWRRGSGSG SSIDWWLDGL SGERWLRARG NSHDSVSGEI 501: AKSCGISSTP SMRGTVCYAA PEYCNLDNNV SEKCDVYSYG VLLLVLISGR RPLEMTGSAS EIQRANLMSW ARKLARRGKL VDLVDQKLQN LDQEQAVLCI 601: KVALLCLQRL PISRPSMKEV LGMLKGEVNL PELPSEFSPS PPLKTTRKQR R |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)