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AT1G77500.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF630 and DUF632)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF630 and DUF632); INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF630 and DUF632) (TAIR:AT1G21740.1); Has 982 Blast hits to 757 proteins in 139 species: Archae - 0; Bacteria - 60; Metazoa - 125; Fungi - 47; Plants - 679; Viruses - 3; Other Eukaryotes - 68 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IJY8eggNOG:ENOG410YB6HEMBL:AC010704EMBL:BT002322
EMBL:CP002684EnsemblPlants:AT1G77500EnsemblPlants:AT1G77500.1entrez:844086
GeneID:844086Gramene:AT1G77500.1hmmpanther:PTHR21450hmmpanther:PTHR21450:SF8
HOGENOM:HOG000238675InterPro:IPR006867InterPro:IPR006868KEGG:ath:AT1G77500
ncoils:CoilOMA:SCGKEVAPfam:PF04782Pfam:PF04783
PhylomeDB:Q9CAQ5PIR:D96804Proteomes:UP000006548RefSeq:NP_177874.1
STRING:3702.AT1G77500.1TAIR:AT1G77500UniGene:At.34465UniProt:Q9CAQ5
Coordinates (TAIR10) chr1:+:29121753..29124937
Molecular Weight (calculated) 98627.50 Da
IEP (calculated) 7.07
GRAVY (calculated) -0.71
Length 879 amino acids
Sequence (TAIR10)
(BLAST)
001: MGCGGSKVDN QPIVILCRER KELLKAASYH RSALAVAHLT YFQSLSDVGE AIQRFVDDEV VAGFSSSSSP DSPVLTLPSD EGKPTKHKRI SPSSTTSISH
101: SVIEEEDTDD DSHLHLSSGS ESESEVGSKD HIQITSTPEQ ERSTESFPSG YHPTNYAPPV YPPGYPPGYP FSYPTGYSSG NYQPGYPNYT GENPYGNRGM
201: YYMKKSAPQS RPFIFQPENH RVEENAQWPS DSGFRNTGVQ RRSPSPLPPP SPPTVSTWDF LNVFDTYDYS NARSRASGYY PMGMASISSS PDSKEVRERE
301: GIPELEEVTE QEVIKQVYRR PKRPGLEKVK EHRDEHKHNV FPERNINKRE VPMPEQVTES SLDSETISSF SGSDVESEFH YVNGGEGKSS SISSISHGAG
401: TKSSREVEEQ YGRKKGVSFE LEETTSTSSF DVESSKISSL SSLSIHATRD LREVVKEIKS EFEIASSCGK EVALLLEVGK LPYQHKNNGV KVILSRIMYL
501: VAPSTRSSHS QPRLSIRLTS RTRKMAKSYN GQDVNGGFNG NLSSTLEKLY AWEKKLYKEV KDEEKLRAIY EEKCRRLKKM DSHGAESIKI DATRAAIRKL
601: LTKIDVCIRS VDSISSRIHK LRDEELQPQL IQLIHGLIRM WRSMLRCHQK QFQAIRESKV RSLKANTTLQ NDSGSTAILD LEIELREWCI SFNNWVNTQK
701: SYVQFLSGWL TKCLHYEPEA TDDGIAPFSP SQIGAPPIFI ICKDWQEAMC RISGENVTNA MQGFASSLHE LWEKQEEEQR VKAQSEQRDA ESERSVVSKG
801: RSESGISALD DLKVDLDSMR KRLVEERGKG KETIKLVNNA SSSSLKAGLV PIFGALRKFT SEVVKAHEIV RLQHPQTSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)