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AT4G25300.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.928
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: flavonoid biosynthetic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G25310.1); Has 8488 Blast hits to 8445 proteins in 990 species: Archae - 0; Bacteria - 1083; Metazoa - 108; Fungi - 972; Plants - 4966; Viruses - 0; Other Eukaryotes - 1359 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G25300-MONOMERBioCyc:ARA:GQT-1049-MONOMEReggNOG:COG3491eggNOG:KOG0143
EMBL:AL035396EMBL:AL161563EMBL:CP002687EnsemblPlants:AT4G25300
EnsemblPlants:AT4G25300.1entrez:828633ExpressionAtlas:Q9SB33Gene3D:2.60.120.330
GeneID:828633GO:GO:0016491GO:GO:0046872Gramene:AT4G25300.1
gramene_pathway:1.14.11.9gramene_pathway:PWY-5152gramene_pathway:PWY1F-823gramene_pathway:PWY1F-FLAVSYN
hmmpanther:PTHR10209hmmpanther:PTHR10209:SF168InterPro:IPR005123InterPro:IPR026992
InterPro:IPR027443KEGG:ath:AT4G25300OMA:DMFFLTMPfam:PF03171
Pfam:PF14226Pfscan:PS51471PhylomeDB:Q9SB33PIR:T05551
PROSITE:PS51471Proteomes:UP000006548RefSeq:NP_194260.1SMR:Q9SB33
STRING:3702.AT4G25300.1SUPFAM:SSF51197TAIR:AT4G25300UniGene:At.27751
UniProt:Q9SB33
Coordinates (TAIR10) chr4:+:12945263..12946642
Molecular Weight (calculated) 40411.00 Da
IEP (calculated) 5.76
GRAVY (calculated) -0.23
Length 356 amino acids
Sequence (TAIR10)
(BLAST)
001: MEVKGATRSS IIVPSVQEMV KEKMITTVPP RYVRSDQDVA EIAVDSGLRN QIPIIDMSLL CSSTSMDSEI DKLDSACKEW GFFQLVNHGM ESSFLNKVKS
101: EVQDFFNLPM EEKKNLWQQP DEIEGFGQVF VVSEEQKLDW ADMFFLTMQP VRLRKPHLFP KLPLPFRDTL DMYSAEVKSI AKILLGKIAV ALKIKPEEMD
201: KLFDDELGQR IRLNYYPRCP EPDKVIGLTP HSDSTGLTIL LQANEVEGLQ IKKNAKWVSV KPLPNALVVN VGDILEIITN GTYRSIEHRG VVNSEKERLS
301: VAAFHNIGLG KEIGPMRSLV ERHKAAFFKS VTTEEYFNGL FSRELDGKAY LDVMRL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)