AT1G74300.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:extracellular 0.999 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||
Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||
Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G74280.1); Has 1098 Blast hits to 1097 proteins in 261 species: Archae - 18; Bacteria - 573; Metazoa - 24; Fungi - 62; Plants - 313; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
Protein Annotations |
|
||||||||||||||||||||||||||||||||||||
Coordinates (TAIR10) | chr1:+:27935368..27936474 | ||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 38711.60 Da | ||||||||||||||||||||||||||||||||||||
IEP (calculated) | 7.77 | ||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.21 | ||||||||||||||||||||||||||||||||||||
Length | 346 amino acids | ||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MAIGPSSVII IVGIILALTY QSILKPPPPN LCGSPGGPPI TAPRIKLRDG RHLAYKEYGL PREKAKHKIV FIHGSDSCRH DAVFATLLSP DLVQERGVYM 101: VSFDKPGYGE SDPDPIRTPK SLALDIEELA DQLSLGSKFY VIGKSMGGQA AWGCLKYTPH RLAGVTLVAP VVNYYWRNLP LNISTEGFNL QQKRDQWAVR 201: VAHYAPWLIY WWNTQNWFPG SSVVNRDGGV LSQPDKDIIL KLGSSRKPHL AEVRQQGIHE SINRDMIVGF GNWEFDPLEL ENPFLNREGS VHLWQGDEDM 301: LVPVTLQRYI ADKLPWLHYH EVAGGGHFFP LAKGVVDEIV KTALNH |
||||||||||||||||||||||||||||||||||||
See Also |
|
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)