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AT1G74300.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
extracellular 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G74280.1); Has 1098 Blast hits to 1097 proteins in 261 species: Archae - 18; Bacteria - 573; Metazoa - 24; Fungi - 62; Plants - 313; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IEFGeggNOG:ENOG4111K8YEMBL:AC020579EMBL:AK227535
EMBL:BT009662EMBL:CP002684EnsemblPlants:AT1G74300EnsemblPlants:AT1G74300.1
entrez:843770ESTHER:arath-F1O17.3Gene3D:3.40.50.1820GeneID:843770
GO:GO:0016021GO:GO:0016787Gramene:AT1G74300.1hmmpanther:PTHR10992
hmmpanther:PTHR10992:SF740InterPro:IPR000073InterPro:IPR029058KEGG:ath:AT1G74300
OMA:DQWAVWVPfam:PF12695Pfam:PF12697PhylomeDB:Q9C915
PIR:E96771Proteomes:UP000006548RefSeq:NP_565082.1STRING:3702.AT1G74300.1
SUPFAM:SSF53474TAIR:AT1G74300TMHMM:TMhelixUniGene:At.48370
UniGene:At.69978UniProt:Q9C915
Coordinates (TAIR10) chr1:+:27935368..27936474
Molecular Weight (calculated) 38711.60 Da
IEP (calculated) 7.77
GRAVY (calculated) -0.21
Length 346 amino acids
Sequence (TAIR10)
(BLAST)
001: MAIGPSSVII IVGIILALTY QSILKPPPPN LCGSPGGPPI TAPRIKLRDG RHLAYKEYGL PREKAKHKIV FIHGSDSCRH DAVFATLLSP DLVQERGVYM
101: VSFDKPGYGE SDPDPIRTPK SLALDIEELA DQLSLGSKFY VIGKSMGGQA AWGCLKYTPH RLAGVTLVAP VVNYYWRNLP LNISTEGFNL QQKRDQWAVR
201: VAHYAPWLIY WWNTQNWFPG SSVVNRDGGV LSQPDKDIIL KLGSSRKPHL AEVRQQGIHE SINRDMIVGF GNWEFDPLEL ENPFLNREGS VHLWQGDEDM
301: LVPVTLQRYI ADKLPWLHYH EVAGGGHFFP LAKGVVDEIV KTALNH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)