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AT4G23240.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.702
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cysteine-rich RLK (RECEPTOR-like protein kinase) 16
Curator
Summary (TAIR10)
Encodes a cysteine-rich receptor-like protein kinase.
Computational
Description (TAIR10)
cysteine-rich RLK (RECEPTOR-like protein kinase) 16 (CRK16); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 21 (TAIR:AT4G23290.1); Has 114939 Blast hits to 113657 proteins in 4192 species: Archae - 100; Bacteria - 13362; Metazoa - 42416; Fungi - 9590; Plants - 32458; Viruses - 412; Other Eukaryotes - 16601 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G23240-MONOMEREC:2.7.11.-eggNOG:COG0515eggNOG:KOG1187
EMBL:AL022347EMBL:AL161559EMBL:CP002687EnsemblPlants:AT4G23240
EnsemblPlants:AT4G23240.1entrez:828423Gene3D:2.60.120.200GeneID:828423
Genevisible:O65476GO:GO:0004674GO:GO:0005524GO:GO:0016021
Gramene:AT4G23240.1hmmpanther:PTHR27002InParanoid:O65476InterPro:IPR000719
InterPro:IPR001245InterPro:IPR002902InterPro:IPR008271InterPro:IPR011009
InterPro:IPR013320InterPro:IPR017441KEGG:ath:AT4G23240PaxDb:O65476
Pfam:O65476Pfam:PF01657Pfam:PF07714Pfscan:PS50011
PhylomeDB:O65476PIR:T04841PRIDE:O65476PRO:PR:O65476
PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011PROSITE:PS51473
ProteinModelPortal:O65476Proteomes:UP000006548RefSeq:NP_194055.1scanprosite:PS00108
SMART:SM00220SMR:O65476STRING:3702.AT4G23240.1SUPFAM:SSF56112
TAIR:AT4G23240tair10-symbols:CRK16UniGene:At.54488UniProt:O65476
Coordinates (TAIR10) chr4:-:12160502..12161954
Molecular Weight (calculated) 39552.30 Da
IEP (calculated) 5.68
GRAVY (calculated) -0.19
Length 352 amino acids
Sequence (TAIR10)
(BLAST)
001: MLSAADDITT SGSLQFDFKA IEAATNNFQK SNKLGHGGFG EGTFPNGTEV AVKRLSKISG QGEEEFKNEV LLVAKLQHRN LVRLLGFSVE GEEKILVYEY
101: MPNKSLDYFL FDHRRRGQLD WRTRYNIIRG VTRGILYLHQ DSRLTIIHRD LKAGNILLDV DMNPKIADFG VARNFRVDQT EATTGRVVGT FGYMPPEYVA
201: NGQFSMKSDV YSFGVLILEI IVGKKSSSFH EIDGSVGNLV TYVWRLWNNE SFLELVDPAM GESYDKDEVI RCIHISLLCV QENPADRPTM STVFQMLTNT
301: FLTLPVPQLP GFVFRVRSEP NPLAERLEPG PSTTMSFACS IDDASITSVD LR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)