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AT4G16480.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.969
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : inositol transporter 4
Curator
Summary (TAIR10)
Encodes a high affinity H+:<i>myo</i>-inositol symporter. The only other compound shown to be transported was pinitol, a methylated derivative of <i>myo</i>-inositol.
Computational
Description (TAIR10)
inositol transporter 4 (INT4); FUNCTIONS IN: carbohydrate transmembrane transporter activity, myo-inositol:hydrogen symporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nositol transporter 3 (TAIR:AT2G35740.1); Has 51354 Blast hits to 41404 proteins in 2520 species: Archae - 707; Bacteria - 26083; Metazoa - 6832; Fungi - 11387; Plants - 4246; Viruses - 2; Other Eukaryotes - 2097 (source: NCBI BLink).
Protein Annotations
BioGrid:12639eggNOG:ENOG410XNQKeggNOG:KOG0254EMBL:AJ973178
EMBL:AL161544EMBL:BT004139EMBL:BT005707EMBL:CP002687
EMBL:Z97341EnsemblPlants:AT4G16480EnsemblPlants:AT4G16480.1entrez:827346
GeneID:827346Genevisible:O23492GO:GO:0005351GO:GO:0005355
GO:GO:0005886GO:GO:0005887GO:GO:0015992GO:GO:0035428
GO:GO:0046323GO:GO:1904659Gramene:AT4G16480.1hmmpanther:PTHR23500
hmmpanther:PTHR23500:SF149HOGENOM:HOG000202868InParanoid:O23492InterPro:IPR003663
InterPro:IPR005828InterPro:IPR005829InterPro:IPR020846KEGG:ath:AT4G16480
KO:K08150ncoils:CoilOMA:NATCSAYPaxDb:O23492
Pfam:O23492Pfam:PF00083Pfscan:PS50850PhylomeDB:O23492
PIR:F71431PRIDE:O23492PRINTS:PR00171PRO:PR:O23492
PROSITE:PS00216PROSITE:PS00217PROSITE:PS50850ProteinModelPortal:O23492
Proteomes:UP000006548Reactome:R-ATH-429593RefSeq:NP_193381.1scanprosite:PS00216
scanprosite:PS00217SMR:O23492STRING:3702.AT4G16480.1SUPFAM:SSF103473
TAIR:AT4G16480tair10-symbols:ATINT4tair10-symbols:INT4TCDB:2.A.1.1.62
TIGRfam:TIGR00879TIGRFAMs:TIGR00879TMHMM:TMhelixUniGene:At.33074
UniProt:O23492
Coordinates (TAIR10) chr4:+:9291246..9293083
Molecular Weight (calculated) 62895.30 Da
IEP (calculated) 8.77
GRAVY (calculated) 0.46
Length 582 amino acids
Sequence (TAIR10)
(BLAST)
001: MVEGGIAKAD KTEFTECWRT TWKTPYIMRL ALSAGIGGLL FGYDTGVISG ALLFIKEDFD EVDKKTWLQS TIVSMAVAGA IVGAAVGGWI NDKFGRRMSI
101: LIADVLFLIG AIVMAFAPAP WVIIVGRIFV GFGVGMASMT SPLYISEASP ARIRGALVST NGLLITGGQF FSYLINLAFV HTPGTWRWML GVAGVPAIVQ
201: FVLMLSLPES PRWLYRKDRI AESRAILERI YPADEVEAEM EALKLSVEAE KADEAIIGDS FSAKLKGAFG NPVVRRGLAA GITVQVAQQF VGINTVMYYS
301: PSIVQFAGYA SNKTAMALSL ITSGLNALGS IVSMMFVDRY GRRKLMIISM FGIIACLIIL ATVFSQAAIH APKIDAFESR TFAPNATCSA YAPLAAENAP
401: PSRWNCMKCL RSECGFCASG VQPYAPGACV VLSDDMKATC SSRGRTFFKD GCPSKFGFLA IVFLGLYIVV YAPGMGTVPW IVNSEIYPLR YRGLGGGIAA
501: VSNWVSNLIV SESFLSLTHA LGSSGTFLLF AGFSTIGLFF IWLLVPETKG LQFEEVEKLL EVGFKPSLLR RREKKGKEVD AA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)