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AT4G14680.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Pseudouridine synthase/archaeosine transglycosylase-like family protein
Curator
Summary (TAIR10)
ATP sulfurylase
Computational
Description (TAIR10)
APS3; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Sulphate adenylyltransferase (InterPro:IPR002650); BEST Arabidopsis thaliana protein match is: ATP sulfurylase 1 (TAIR:AT3G22890.1); Has 2059 Blast hits to 2056 proteins in 649 species: Archae - 98; Bacteria - 865; Metazoa - 242; Fungi - 201; Plants - 189; Viruses - 0; Other Eukaryotes - 464 (source: NCBI BLink).
Protein Annotations
BioCyc:MetaCyc:AT4G14680-MONOMERBioGrid:12415EC:2.7.7.4eggNOG:COG2046
eggNOG:KOG0636EMBL:AL161539EMBL:CP002687EMBL:U06275
EMBL:U59738EMBL:Z97336EnsemblPlants:AT4G14680EnsemblPlants:AT4G14680.1
entrez:827118Gene3D:3.40.50.620GeneID:827118Genevisible:O23324
GO:GO:0000103GO:GO:0004020GO:GO:0004781GO:GO:0005524
GO:GO:0009507GO:GO:0009570GO:GO:0009970GO:GO:0016310
GO:GO:0070206GO:GO:0070814Gramene:AT4G14680.1hmmpanther:PTHR11055
hmmpanther:PTHR11055:SF24HOGENOM:HOG000069045InParanoid:O23324InterPro:IPR002650
InterPro:IPR014729InterPro:IPR015947InterPro:IPR024951InterPro:IPR025980
KEGG:00230+2.7.7.4KEGG:00261+2.7.7.4KEGG:00450+2.7.7.4KEGG:00920+2.7.7.4
KEGG:ath:AT4G14680KO:K13811OMA:PFELRKEPaxDb:O23324
Pfam:O23324Pfam:PF01747Pfam:PF14306PhylomeDB:O23324
PIR:E71409PRIDE:O23324PRO:PR:O23324ProteinModelPortal:O23324
Proteomes:UP000006548RefSeq:NP_193204.1SMR:O23324STRING:3702.AT4G14680.1
SUPFAM:SSF52374SUPFAM:SSF88697TAIR:AT4G14680tair10-symbols:APS3
TIGRfam:TIGR00339TIGRFAMs:TIGR00339UniGene:At.23929UniPathway:UPA00140
UniProt:O23324
Coordinates (TAIR10) chr4:-:8413443..8415311
Molecular Weight (calculated) 52032.70 Da
IEP (calculated) 7.47
GRAVY (calculated) -0.32
Length 465 amino acids
Sequence (TAIR10)
(BLAST)
001: MASMSTVFPK PTSFISQPLT KSHKSDSVTT SISFPSNSKT RSLRTISVRA GLIEPDGGKL VDLVVPEPRR REKKHEAADL PRVRLTAIDL QWMHVLSEGW
101: ASPLRGFMRE SEFLQTLHFN LLNLDDGSVV NMSVPIVLAI DDQQKALIGE SKRVSLVDSD DNPIAILNDI EIYKHPKEER IARTWGTTAP GLPYVEEAIT
201: NAGDWLIGGD LEVLEPVKYN DGLDRFRLSP FELRKELEKR GADAVFAFQL RNPVHNGHAL LMTDTRRRLL EMGYKNPILL LHPLGGFTKA DDVPLSWRMK
301: QHEKVLEDGV LDPETTVVSI FPSPMLYAGP TEVQWHAKAR INAGANFYIV GRDPAGMGHP VEKRDLYDAD HGKKVLSMAP GLERLNILPF RVAAYDKTQG
401: KMAFFDPSRA QDFLFISGTK MRALAKNREN PPDGFMCPGG WKVLVDYYDS LTLTGNTKLP EKIPV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)