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AT4G14430.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
peroxisome 1.000
ASURE: peroxisome
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31871212 (2020): mitochondrion
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:24130194 (2013): peroxisome
  • PMID:23750852 (2013): mitochondrion
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:21841088 (2011): mitochondrion
  • PMID:21311031 (2011): mitochondrion
  • PMID:19329564 (2009): peroxisome
  • PMID:18931141 (2008): peroxisome
  • PMID:17951448 (2007): peroxisome
FP Images

Arabidopsis cell culture (peroxisomal marker)

At4g-GFP-14430
(full-length)
RFP-peroxisomal markeroverlay

Images by John Bussel
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : indole-3-butyric acid response 10
Curator
Summary (TAIR10)
Encodes a peroxisomal delta3, delta2-enoyl CoA isomerase, involved in unsaturated fatty acid degradation. This enzyme might also be involved in the conversion of indole-3-butyric acid to indole-3-acetic acid via a beta-oxidation-like pathway.
Computational
Description (TAIR10)
indole-3-butyric acid response 10 (IBR10); FUNCTIONS IN: catalytic activity, dodecenoyl-CoA delta-isomerase activity; INVOLVED IN: fatty acid catabolic process, root hair elongation, metabolic process, indolebutyric acid metabolic process, response to indolebutyric acid stimulus; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Crotonase, core (InterPro:IPR001753); BEST Arabidopsis thaliana protein match is: 3-hydroxyacyl-CoA dehydratase 1 (TAIR:AT4G14440.1); Has 14072 Blast hits to 14069 proteins in 1567 species: Archae - 245; Bacteria - 9896; Metazoa - 835; Fungi - 284; Plants - 269; Viruses - 0; Other Eukaryotes - 2543 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G14430-MONOMERBioCyc:MetaCyc:AT4G14430-MONOMEREC:5.3.3.8eggNOG:ENOG410IJI2
eggNOG:ENOG410YFAMEMBL:AF380640EMBL:AK229431EMBL:AL161539
EMBL:AY056091EMBL:AY086877EMBL:CP002687EMBL:Z97336
EnsemblPlants:AT4G14430EnsemblPlants:AT4G14430.1entrez:827088Gene3D:3.90.226.10
GeneID:827088Genevisible:O23299GO:GO:0004165GO:GO:0005777
GO:GO:0006635GO:GO:0009062GO:GO:0048767GO:GO:0080024
GO:GO:0080026Gramene:AT4G14430.1gramene_pathway:4.2.-.-gramene_pathway:5.3.3.8
gramene_pathway:PWY-5137gramene_pathway:PWY-5138gramene_pathway:PWY-6066hmmpanther:PTHR11941
hmmpanther:PTHR11941:SF84HOGENOM:HOG000080529IntAct:O23299InterPro:IPR001753
InterPro:IPR029045KEGG:ath:AT4G14430OMA:INGHCMAPaxDb:O23299
Pfam:O23299Pfam:PF00378PhylomeDB:O23299PIR:D71406
PRIDE:O23299PRO:PR:O23299ProMEX:O23299ProteinModelPortal:O23299
Proteomes:UP000006548RefSeq:NP_193179.1SMR:O23299STRING:3702.AT4G14430.1
SUPFAM:SSF52096TAIR:AT4G14430tair10-symbols:ATECI2tair10-symbols:ECHIB
tair10-symbols:ECI2tair10-symbols:IBR10tair10-symbols:PEC12UniGene:At.25366
UniPathway:UPA00659UniProt:O23299
Coordinates (TAIR10) chr4:-:8304910..8305632
Molecular Weight (calculated) 25774.30 Da
IEP (calculated) 8.66
GRAVY (calculated) 0.14
Length 240 amino acids
Sequence (TAIR10)
(BLAST)
001: MCTLEKRGDL FLLTLTGDGE HRFHPDTIAT ILSLLEQAKS QSTRGSILIT TANGKFFSNG FDLAWAQTAG SKTGAANRLH QMVESFKPVV AALLDLPMPT
101: IAALNGHAAA AGLILALSHD YVFMRKDRGV LYMSEVDIGL SMPDYFSALV RAKIGTSAAR RELLLSGKKI RGEEAVGLGI VDSAAYDSEE GVVVASVRLG
201: EKLAAKKWSG EVYASIRKSL YPELCGILGL ETRVFATPKL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)