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AT4G04320.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
peroxisome 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : malonyl-CoA decarboxylase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
malonyl-CoA decarboxylase family protein; FUNCTIONS IN: malonyl-CoA decarboxylase activity; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Malonyl-CoA decarboxylase (InterPro:IPR007956); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G04320-MONOMEReggNOG:COG1593eggNOG:KOG3018EMBL:AK229719
EMBL:BT008686EMBL:CP002687EnsemblPlants:AT4G04320EnsemblPlants:AT4G04320.1
entrez:825752ExpressionAtlas:Q7Y1Z8GeneID:825752GO:GO:0005777
GO:GO:0006633GO:GO:0050080Gramene:AT4G04320.1hmmpanther:PTHR28641
hmmpanther:PTHR28641:SF1InterPro:IPR007956KEGG:00410+4.1.1.9KEGG:00640+4.1.1.9
KEGG:ath:AT4G04320KO:K01578OMA:LDEGREQPfam:PF05292
PhylomeDB:Q7Y1Z8Proteomes:UP000006548Reactome:R-ATH-390918RefSeq:NP_192341.2
SMR:Q7Y1Z8STRING:3702.AT4G04320.1TAIR:AT4G04320UniGene:At.34032
UniGene:At.63645unipathway:UPA00340UniProt:Q7Y1Z8
Coordinates (TAIR10) chr4:+:2113565..2116525
Molecular Weight (calculated) 58455.30 Da
IEP (calculated) 7.42
GRAVY (calculated) -0.27
Length 518 amino acids
Sequence (TAIR10)
(BLAST)
001: MSKKNLAILL RARMRSNNPS KFSLSQFPKE IQSNPQENHS RDHIVQNSND FGTTGRVYDV VRETMHSAIS ASKTGVLDIT LNDFQEGYFS LSLEDREKLL
101: LVLAKEYDVN REQVRELVKQ YLGLETPASD DDKGALSSVF YRIERNLRHA LRPTYEVLFE RLNTHPGGLR FLSILRADLL SILSKENTPS LRTLDSFLKE
201: KLGMWLSPAT LELHQITWDD PASLLEKIVA YEAVHPISNL LDLKRRLGIG RRCFGYFHPS VPGEPLIFIE VALMETVAQT IQEVLWDNPP IPENQATCAL
301: FYSISSTQPG LAGINLGKFL IKRVITLVKK DMPHVSTFAT LSPIPGFMQW LLSKLSSQSR FAEDERGTQS NSPSSTFSEK VLLPEEEHAL MTLSDESSSG
401: SNGMEVLLNL LSVKNCDWAT SPRLLPVLEP ILMRLCARYL LQEKKRGKAL DSVANFHLQN GAMVERINWM ADRSEKGIRQ SGGIMVNYVY RLENIEDYAQ
501: SYFGSGKIHA SPGIHSRL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)