AT3G51130.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:peroxisome 0.969 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0183 (InterPro:IPR005373); Has 269 Blast hits to 265 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 82; Plants - 37; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:18994219..18997180 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 45684.50 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.51 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.25 | ||||||||||||||||||||||||||||||||
| Length | 410 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKDYSKIGDK LVMQRPRRRL EGTAMGATVF DLRPGVGIGP FSIGMPICEA FAQIEQQPNI YDVVHVKYYD EDPLKLDVVI SFPDHGFHLR FDPWSQRLRL 101: VEIFDVKRLQ MRYATSMIGG PSTLATFVAV YALFGPTFPG IYDKERGIYS LFYPGLSFEF PIPNQYTDCC HDGEAALPLE FPDGTTPVTC RVSIYDNSSD 201: KKVGVGKLMD RASVPPLPPG SLYMEEVHVK PGKELYFTVG GQHMPFGASP QDVWTELGRP CGIHPKQVDQ MVIHSASDPR PKTTICGDYF YNYFTRGLDI 301: LFDGETHKVK KFVLHTNYPG HADFNSYIKC NFVISAGADA AEANRSGNKI TPSTNWDQVK EILGECGPAA IQTQGSTSNP FGSTYVYGYQ NVAFEVMKNG 401: HIATITLFQS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)