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AT3G51130.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
peroxisome 0.969
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31520498 (2020): mitochondrion
  • PMID:28865150 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0183 (InterPro:IPR005373); Has 269 Blast hits to 265 proteins in 123 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 82; Plants - 37; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XT40eggNOG:KOG2819EMBL:AL132980EMBL:AY037194
EMBL:AY086173EMBL:BT002670EMBL:CP002686EnsemblPlants:AT3G51130
EnsemblPlants:AT3G51130.1entrez:824277GeneID:824277Genevisible:Q9SD33
hmmpanther:PTHR13465HOGENOM:HOG000007940InParanoid:Q9SD33InterPro:IPR005373
KEGG:ath:AT3G51130OMA:NIYHRCDPaxDb:Q9SD33Pfam:PF03676
Pfam:Q9SD33PhylomeDB:Q9SD33PIR:T45744PRIDE:Q9SD33
PRO:PR:Q9SD33Proteomes:UP000006548RefSeq:NP_566945.1STRING:3702.AT3G51130.1
TAIR:AT3G51130TMHMM:TMhelixUniGene:At.859UniProt:Q9SD33
Coordinates (TAIR10) chr3:+:18994219..18997180
Molecular Weight (calculated) 45684.50 Da
IEP (calculated) 6.51
GRAVY (calculated) -0.25
Length 410 amino acids
Sequence (TAIR10)
(BLAST)
001: MKDYSKIGDK LVMQRPRRRL EGTAMGATVF DLRPGVGIGP FSIGMPICEA FAQIEQQPNI YDVVHVKYYD EDPLKLDVVI SFPDHGFHLR FDPWSQRLRL
101: VEIFDVKRLQ MRYATSMIGG PSTLATFVAV YALFGPTFPG IYDKERGIYS LFYPGLSFEF PIPNQYTDCC HDGEAALPLE FPDGTTPVTC RVSIYDNSSD
201: KKVGVGKLMD RASVPPLPPG SLYMEEVHVK PGKELYFTVG GQHMPFGASP QDVWTELGRP CGIHPKQVDQ MVIHSASDPR PKTTICGDYF YNYFTRGLDI
301: LFDGETHKVK KFVLHTNYPG HADFNSYIKC NFVISAGADA AEANRSGNKI TPSTNWDQVK EILGECGPAA IQTQGSTSNP FGSTYVYGYQ NVAFEVMKNG
401: HIATITLFQS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)