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AT4G35860.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 0.997
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31818904 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31541795 (2020): plasma membrane
  • PMID:31520498 (2020): mitochondrion
  • PMID:31023727 (2019): mitochondrion
  • PMID:30962257 (2019): plastid
  • PMID:30447334 (2019): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26781341 (2016): plasma membrane
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22574745 (2012): mitochondrion
  • PMID:22550958 (2012): plastid
  • PMID:22318864 (2012): plasma membrane
  • PMID:22215637 (2012): plasma membrane
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:21896887 (2011): mitochondrion mitochondrial envelope mitochondrial outer membrane
  • PMID:21826108 (2012): Golgi trans-Golgi network multivesicular body
  • PMID:18431481 (2008): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : GTP-binding 2
Curator
Summary (TAIR10)
GTP-binding protein ATGB2
Computational
Description (TAIR10)
GTP-binding 2 (GB2); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog B1C (TAIR:AT4G17170.1); Has 26616 Blast hits to 26543 proteins in 733 species: Archae - 16; Bacteria - 127; Metazoa - 14148; Fungi - 3650; Plants - 2938; Viruses - 20; Other Eukaryotes - 5717 (source: NCBI BLink).
Protein Annotations
BioGrid:15022eggNOG:COG1100eggNOG:KOG0098EMBL:AL031986
EMBL:AL161588EMBL:AY065262EMBL:AY085750EMBL:AY117348
EMBL:CP002687EMBL:U46925EnsemblPlants:AT4G35860EnsemblPlants:AT4G35860.1
entrez:829740Gene3D:3.40.50.300GeneID:829740Genevisible:Q38922
GO:GO:0005525GO:GO:0005886GO:GO:0007264GO:GO:0009507
GO:GO:0015031hmmpanther:PTHR24073hmmpanther:PTHR24073:SF597HOGENOM:HOG000233968
InParanoid:Q38922IntAct:Q38922InterPro:IPR001806InterPro:IPR005225
InterPro:IPR027417KEGG:ath:AT4G35860OMA:PNMSIMLPaxDb:Q38922
Pfam:PF00071Pfam:Q38922Pfscan:PS51419PhylomeDB:Q38922
PIR:S71585PRIDE:Q38922PRO:PR:Q38922PROSITE:PS51419
ProteinModelPortal:Q38922Proteomes:UP000006548RefSeq:NP_001078499.1RefSeq:NP_195311.1
SMR:Q38922STRING:3702.AT4G35860.1SUPFAM:SSF52540TAIR:AT4G35860
tair10-symbols:ATGB2tair10-symbols:ATRAB2Ctair10-symbols:ATRABB1Btair10-symbols:GB2
TIGRfam:TIGR00231TIGRFAMs:TIGR00231UniGene:At.2486UniGene:At.70211
UniProt:Q38922
Coordinates (TAIR10) chr4:-:16987118..16988839
Molecular Weight (calculated) 23176.50 Da
IEP (calculated) 7.03
GRAVY (calculated) -0.25
Length 211 amino acids
Sequence (TAIR10)
(BLAST)
001: MSYDYLFKYI IIGDTGVGKS CLLLQFTDKR FQPVHDLTIG VEFGARMVTV DGRPIKLQIW DTAGQESFRS ITRSYYRGAA GALLVYDITR RETFNHLASW
101: LEDARQHANP NMSIMLIGNK CDLAHKRAVS KEEGQQFAKE HGLLFLEASA RTAQNVEEAF IETAAKILQN IQDGVFDVSN ESSGIKIGYG RTQGAAGGRD
201: GTISQGGGCC G
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)