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AT4G00110.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.671
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : UDP-D-glucuronate 4-epimerase 3
Curator
Summary (TAIR10)
Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase.
Computational
Description (TAIR10)
UDP-D-glucuronate 4-epimerase 3 (GAE3); FUNCTIONS IN: UDP-glucuronate 4-epimerase activity, catalytic activity; INVOLVED IN: cellular metabolic process, carbohydrate metabolic process, nucleotide-sugar metabolic process, metabolic process; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040), Nucleotide sugar epimerase (InterPro:IPR008089); BEST Arabidopsis thaliana protein match is: UDP-D-glucuronate 4-epimerase 2 (TAIR:AT1G02000.1); Has 43399 Blast hits to 43389 proteins in 2971 species: Archae - 792; Bacteria - 26013; Metazoa - 773; Fungi - 412; Plants - 1214; Viruses - 37; Other Eukaryotes - 14158 (source: NCBI BLink).
Protein Annotations
BRENDA:5.1.3.6EC:5.1.3.6eggNOG:COG0451eggNOG:ENOG410IU3F
EMBL:AF069299EMBL:AL161471EMBL:BT026487EMBL:CP002687
EnsemblPlants:AT4G00110EnsemblPlants:AT4G00110.1entrez:828145Gene3D:3.40.50.720
GeneID:828145Genevisible:O81312GO:GO:0005975GO:GO:0016020
GO:GO:0016021GO:GO:0032580GO:GO:0050378Gramene:AT4G00110.1
gramene_pathway:5.1.3.6gramene_pathway:PWY-4861hmmpanther:PTHR10366hmmpanther:PTHR10366:SF356
HOGENOM:HOG000168000InParanoid:O81312InterPro:IPR008089InterPro:IPR016040
KEGG:ath:AT4G00110KO:K08679OMA:IIGHINIPaxDb:O81312
Pfam:O81312Pfam:PF16363PhylomeDB:O81312PIR:T01339
PRIDE:O81312PRINTS:PR01713PRO:PR:O81312ProteinModelPortal:O81312
Proteomes:UP000006548RefSeq:NP_191922.1SMR:O81312STRING:3702.AT4G00110.1
SUPFAM:SSF51735TAIR:AT4G00110tair10-symbols:GAE3TMHMM:TMhelix
UniGene:At.27610UniProt:O81312
Coordinates (TAIR10) chr4:-:38702..39994
Molecular Weight (calculated) 47692.20 Da
IEP (calculated) 10.51
GRAVY (calculated) -0.23
Length 430 amino acids
Sequence (TAIR10)
(BLAST)
001: MKQMSHLDDI PSTPGKFKPY FHRTRWQSSV AKLAFWSLVF VGLIFIFFYR SPVSSNPADP SRRSLRTYSW GGPAWEKRVR SSARLRTRRG FSVLVTGAAG
101: FVGTHVSAAL KRRGDGVLGL DNFNDYYDPS LKRARQALLE RSGVFVVEGD INDAALLKKL FEVVPFTHVM HLAAQAGVRY AMENPSSYVH SNIAGFVNLL
201: EVCKSANPQP AIVWASSSSV YGLNTKVPFS EKDRTDQPAS LYAATKKAGE EIAHTYNHIY GLSLTGLRFF TVYGPWGRPD MAYFFFTRDI LKGKAISIFE
301: GVNHGTVARD FTYIDDIVKG CLGALDTAEK STGSGGKKRG AAQLRVFNLG NTSPVPVTDL VTILERLLKV KAKRNIMKLP RNGDVQFTHA NISSAQRELG
401: YKPTTDLQTG LKKFARWYLG YYNGGKKAAS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)