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AT3G61680.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.995
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: triglyceride lipase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Lipase, class 3 (InterPro:IPR002921); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G02660.1); Has 210 Blast hits to 205 proteins in 59 species: Archae - 0; Bacteria - 15; Metazoa - 3; Fungi - 31; Plants - 122; Viruses - 0; Other Eukaryotes - 39 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IIK5eggNOG:ENOG410ZUTCEMBL:AK228526EMBL:BT008609
EMBL:BT046186EMBL:CP002686EnsemblPlants:AT3G61680EnsemblPlants:AT3G61680.1
entrez:825341ESTHER:arath-At3g61680Gene3D:3.40.50.1820GeneID:825341
GO:GO:0006629GO:GO:0016787Gramene:AT3G61680.1hmmpanther:PTHR21493
hmmpanther:PTHR21493:SF124InterPro:IPR002921InterPro:IPR029058KEGG:ath:AT3G61680
ncoils:CoilOMA:ARTRCFVPfam:PF01764PhylomeDB:Q7Y220
Proteomes:UP000006548RefSeq:NP_191727.2SMR:Q7Y220STRING:3702.AT3G61680.1
SUPFAM:SSF53474TAIR:AT3G61680UniGene:At.34249UniProt:Q7Y220
Coordinates (TAIR10) chr3:+:22824630..22826926
Molecular Weight (calculated) 71739.00 Da
IEP (calculated) 7.09
GRAVY (calculated) -0.35
Length 649 amino acids
Sequence (TAIR10)
(BLAST)
001: MAFNTAMAST SPAAANDVLR EHIGLRRSLS GQDLVLKGGG IRRSSSDNHL CCRSGNNNNR ILAVSVRPGM KTSRSVGVFS FQISSSIIPS PIKTLLFETD
101: TSQDEQESDE IEIETEPNLD GAKKANWVER LLEIRRQWKR EQKTESGNSD VAEESVDVTC GCEEEEGCIA NYGSVNGDWG RESFSRLLVK VSWSEAKKLS
201: QLAYLCNLAY TIPEIKGEDL RRNYGLKFVT SSLEKKAKAA ILREKLEQDP THVPVITSPD LESEKQSQRS ASSSASAYKI AASAASYIHS CKEYDLSEPI
301: YKSAAAAQAA ASTMTAVVAA GEEEKLEAAR ELQSLQSSPC EWFVCDDPNT YTRCFVIQGS DSLASWKANL FFEPTKFEDT DVLVHRGIYE AAKGIYEQFL
401: PEITEHLSRH GDRAKFQFTG HSLGGSLSLI VNLMLISRGL VSSEAMKSVV TFGSPFVFCG GEKILAELGL DESHVHCVMM HRDIVPRAFS CNYPDHVALV
501: LKRLNGSFRT HPCLNKNKLL YSPMGKVYIL QPSESVSPTH PWLPPGNALY ILENSNEGYS PTALRAFLNR PHPLETLSQR AAYGSEGSVL RDHDSKNYVK
601: AVNGVLRQHT KLIVRKARIQ RRSVWPVLTS AGRGLNESLT TAEEIMTRV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)