suba logo
AT3G61370.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF3245)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF3245); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3245 (InterPro:IPR021641); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3245) (TAIR:AT4G07940.1); Has 42 Blast hits to 42 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
DNASU:825309eggNOG:ENOG410J4K5eggNOG:ENOG410YYA5EMBL:AL137898
EMBL:BT028888EMBL:CP002686EnsemblPlants:AT3G61370EnsemblPlants:AT3G61370.1
entrez:825309GeneID:825309Gramene:AT3G61370.1hmmpanther:PTHR35741
hmmpanther:PTHR35741:SF1HOGENOM:HOG000242970InterPro:IPR021641KEGG:ath:AT3G61370
OMA:AEQWVNSPfam:PF11595PhylomeDB:Q9M2C7PIR:T47929
Proteomes:UP000006548RefSeq:NP_191696.1TAIR:AT3G61370UniGene:At.34293
UniGene:At.71278UniProt:Q9M2C7
Coordinates (TAIR10) chr3:+:22707796..22708380
Molecular Weight (calculated) 14038.30 Da
IEP (calculated) 10.10
GRAVY (calculated) -1.31
Length 127 amino acids
Sequence (TAIR10)
(BLAST)
001: MTTETAKKKG TPQIFKTDKA QKLAEKWVAS MTRPTEDDPI ETAQEERPHR LGLGAQVSRQ TKRRPSDDPL DQKLEAKFAA VKRKNARLVA EAAGSSKNAG
101: DDSEDDDESE SKSQAFGKKK KNTSTPH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)