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AT1G08780.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:21166475 (2011): cytosol
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : ABI3-interacting protein 3
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ABI3-interacting protein 3 (AIP3); FUNCTIONS IN: unfolded protein binding; INVOLVED IN: protein folding; LOCATED IN: prefoldin complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Prefoldin beta-like (InterPro:IPR002777), Prefoldin, subunit 4 (InterPro:IPR016661); Has 376 Blast hits to 375 proteins in 196 species: Archae - 2; Bacteria - 0; Metazoa - 120; Fungi - 130; Plants - 57; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink).
Protein Annotations
BioGrid:22641eggNOG:COG1382eggNOG:KOG1760EMBL:AC003981
EMBL:AJ251088EMBL:AK227759EMBL:BT004788EMBL:CP002684
EnsemblPlants:AT1G08780EnsemblPlants:AT1G08780.1entrez:837400GeneID:837400
Genevisible:Q9M4B5GO:GO:0005829GO:GO:0006457GO:GO:0016272
GO:GO:0051087Gramene:AT1G08780.1hmmpanther:PTHR21100hmmpanther:PTHR21100:SF9
HOGENOM:HOG000204477InParanoid:Q9M4B5IntAct:Q9M4B5InterPro:IPR002777
InterPro:IPR009053InterPro:IPR016661iPTMnet:Q9M4B5KEGG:ath:AT1G08780
KO:K09550ncoils:CoilOMA:TNKVFQNPANTHER:PTHR21100:SF9
PaxDb:Q9M4B5Pfam:PF01920Pfam:Q9M4B5PIR:H86219
PIRSF:PIRSF016477PRIDE:Q9M4B5PRO:PR:Q9M4B5ProteinModelPortal:Q9M4B5
Proteomes:UP000006548RefSeq:NP_563827.1STRING:3702.AT1G08780.1SUPFAM:SSF46579
TAIR:AT1G08780tair10-symbols:AIP3tair10-symbols:PFD4UniGene:At.27752
UniGene:At.42254UniProt:Q9M4B5
Coordinates (TAIR10) chr1:-:2809925..2811126
Molecular Weight (calculated) 14881.40 Da
IEP (calculated) 4.24
GRAVY (calculated) -0.80
Length 129 amino acids
Sequence (TAIR10)
(BLAST)
001: MQQQGSKSGS EMEVTWEDQQ NINIFSRLNN RVHDLDDDIK SAKEKCENLE DAGNELILAD EEMVRFQIGE VFAHVPRDDV ETKIEEMKEA TCKSLEKLEQ
101: EKESIVTQMA ALKKVLYAKF KDSINLEED
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)