AT3G17160.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 54259 Blast hits to 25265 proteins in 1209 species: Archae - 350; Bacteria - 10795; Metazoa - 16137; Fungi - 8620; Plants - 3305; Viruses - 957; Other Eukaryotes - 14095 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:5852207..5852854 | ||||||||||||||||||||
| Molecular Weight (calculated) | 18315.10 Da | ||||||||||||||||||||
| IEP (calculated) | 3.46 | ||||||||||||||||||||
| GRAVY (calculated) | -1.67 | ||||||||||||||||||||
| Length | 165 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTHVEDDKEF KEKPLVQVLS DDDSEVKEAK DGGGEEVTGG DGEGEANVEE EDDEAENEDD DDDDDDDDDD DEDEDDEEGE EDLGTEYLVR PVGEVEDEDD 101: ASDFDPEENG LDEEEGDEEI EEDDVDEDIS LSAGKSEPLS KRKRVAKDHS EQGDVTGDNI RPSKR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)