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AT3G57240.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31673584 (2019): extracellular region plant-type cell wall
  • PMID:30783145 (2019): extracellular region apoplast
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28818374 (2017): extracellular region plant-type cell wall
  • PMID:25852701 (2015): extracellular region apoplast
  • PMID:16356755 (2006): extracellular region
  • PMID:15593128 (2005): extracellular region
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : beta-1,3-glucanase 3
Curator
Summary (TAIR10)
encodes a member of glycosyl hydrolase family 17
Computational
Description (TAIR10)
beta-1,3-glucanase 3 (BG3); FUNCTIONS IN: cellulase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: response to bacterium; LOCATED IN: apoplast, cell wall; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta-1,3-glucanase 2 (TAIR:AT3G57260.1); Has 2135 Blast hits to 2122 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 16; Plants - 2105; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Protein Annotations
EC:3.2.1.39eggNOG:ENOG410IH05eggNOG:ENOG410YAHPEMBL:AL137080
EMBL:CP002686EMBL:M58464EnsemblPlants:AT3G57240EnsemblPlants:AT3G57240.1
entrez:824891Gene3D:3.20.20.80GeneID:824891Genevisible:F4J270
GO:GO:0005618GO:GO:0005783GO:GO:0005975GO:GO:0008810
GO:GO:0009617GO:GO:0042973GO:GO:0048046Gramene:AT3G57240.1
gramene_pathway:3.2.1.4gramene_pathway:PWY-1001hmmpanther:PTHR32227hmmpanther:PTHR32227:SF49
InParanoid:F4J270InterPro:IPR000490InterPro:IPR013781InterPro:IPR017853
KEGG:ath:AT3G57240OMA:NFGLSYPPaxDb:F4J270Pfam:PF00332
PIR:T45802PRIDE:F4J270PROSITE:PS00587ProteinModelPortal:F4J270
Proteomes:UP000006548RefSeq:NP_191283.2scanprosite:PS00587SMR:F4J270
STRING:3702.AT3G57240.1SUPFAM:SSF51445TAIR:AT3G57240tair10-symbols:BG3
TMHMM:TMhelixUniGene:At.292UniProt:F4J270
Coordinates (TAIR10) chr3:-:21181916..21183045
Molecular Weight (calculated) 37633.60 Da
IEP (calculated) 8.57
GRAVY (calculated) -0.16
Length 341 amino acids
Sequence (TAIR10)
(BLAST)
001: MKMCNGSSFL ASLPLLLLLL SFILASFFDT AVGQIGVCYG RNGNNLRPAS EVVALYQQRN IRRMRLYDPN QETLNALRGS NIELVLDVPN PDLQRLASSQ
101: AEADTWVRNN VRNYANVTFR YISVGNEVQP SDQAASFVLP AMQNIERAVS SLGIKVSTAI DTRGISGFPP SSGTFTPEFR SFIAPVISFL SSKQSPLLVN
201: NYPYFSYTGN MRDIRLDYTL FTAPSTVVND GQNQYRNLFH AILDTVYASL EKAGGGSLEI VVSESGWPTA GGAATGVDNA RTYVNNLIQT VKNGSPRRPG
301: RATETYIFAM FDENSKQGPE TEKFWGLFLP NLQPKYVVNF N
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)