AT3G57180.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
BRASSINAZOLE(BRZ) INSENSITIVE PALE GREEN 2 (BPG2); FUNCTIONS IN: GTP binding; INVOLVED IN: brassinosteroid mediated signaling pathway, developmental process; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G10620.1); Has 5185 Blast hits to 4152 proteins in 947 species: Archae - 97; Bacteria - 1334; Metazoa - 1316; Fungi - 649; Plants - 254; Viruses - 94; Other Eukaryotes - 1441 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:21163663..21166006 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 73091.20 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.24 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.43 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 660 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVVLISSTVT ICNVKPKLED GNFRVSRLIH RPEVPFFSGL SNEKKKKCAV SVMCLAVKKE QVVQSVESVN GTIFPKKSKN LIMSEGRDED EDYGKIICPG 101: CGIFMQDNDP DLPGYYQKRK VIANNLEGDE HVENDELAGF EMVDDDADEE EEGEDDEMDD EIKNAIEGSN SESESGFEWE SDEWEEKKEV NDVELDGFAP 201: AGVGYGNVTE EKEKKKRVSK TERKKIAREE AKKDNYDDVT VCARCHSLRN YGQVKNQAAE NLLPDFDFDR LISTRLIKPM SNSSTTVVVM VVDCVDFDGS 301: FPKRAAKSLF QVLQKAENDP KGSKNLPKLV LVATKVDLLP TQISPARLDR WVRHRAKAGG APKLSGVYMV SARKDIGVKN LLAYIKELAG PRGNVWVIGA 401: QNAGKSTLIN ALSKKDGAKV TRLTEAPVPG TTLGILKIGG ILSAKAKMYD TPGLLHPYLM SLRLNSEERK MVEIRKEVQP RSYRVKAGQS VHIGGLVRLD 501: LVSASVETIY ITIWASHSVS LHLGKTENAE EIFKGHSGLR LQPPIGENRA SELGTWEEKE IQVSGNSWDV KSIDISVAGL GWLSLGLKGA ATLALWTYQG 601: IDVTLREPLV IDRAPYLERP GFWLPKAITE VLGTHSSKLV DARRRKKQQD STDFLSDSVA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)