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AT3G55640.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Mitochondrial substrate carrier family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding, transporter activity; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT3G53940.1); Has 29480 Blast hits to 14258 proteins in 460 species: Archae - 0; Bacteria - 2; Metazoa - 12173; Fungi - 9267; Plants - 4909; Viruses - 0; Other Eukaryotes - 3129 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410ZRF1eggNOG:KOG0752EMBL:AF370255EMBL:AL161667
EMBL:AY063072EMBL:CP002686EnsemblPlants:AT3G55640EnsemblPlants:AT3G55640.1
entrez:824730Gene3D:1.50.40.10GeneID:824730GO:GO:0005886
GO:GO:0016021GO:GO:0055085Gramene:AT3G55640.1hmmpanther:PTHR24089
hmmpanther:PTHR24089:SF307HOGENOM:HOG000165726InterPro:IPR002067InterPro:IPR018108
InterPro:IPR023395KEGG:ath:AT3G55640OMA:MVTGMENPfam:PF00153
Pfscan:PS50920PhylomeDB:Q9M058PIR:T47703PRINTS:PR00926
PROSITE:PS50920Proteomes:UP000006548RefSeq:NP_191123.1SMR:Q9M058
STRING:3702.AT3G55640.1SUPFAM:0048588SUPFAM:SSF103506TAIR:AT3G55640
UniGene:At.1695UniProt:Q9M058
Coordinates (TAIR10) chr3:+:20640048..20642411
Molecular Weight (calculated) 36240.00 Da
IEP (calculated) 10.10
GRAVY (calculated) 0.06
Length 332 amino acids
Sequence (TAIR10)
(BLAST)
001: MVMQTEARVG VSSGHGVASS SHRLTQDQRS HIESASQLLA GGLAGAFSKT CTAPLSRLTI LFQVQGMHTN AAALRKPSIL HEASRILNEE GLKAFWKGNL
101: VTIAHRLPYS SVNFYAYEHY KKFMYMVTGM ENHKEGISSN LFVHFVAGGL AGITAASATY PLDLVRTRLA AQTKVIYYSG IWHTLRSITT DEGILGLYKG
201: LGTTLVGVGP SIAISFSVYE SLRSYWRSTR PHDSPIMVSL ACGSLSGIAS STATFPLDLV RRRKQLEGIG GRAVVYKTGL LGTLKRIVQT EGARGLYRGI
301: LPEYYKVVPG VGICFMTYET LKLYFKDLSS NL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)