AT3G51940.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G03990.1); Has 215 Blast hits to 164 proteins in 38 species: Archae - 0; Bacteria - 35; Metazoa - 16; Fungi - 18; Plants - 121; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). | ||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:19273708..19275157 | ||||||||||||||||||||
| Molecular Weight (calculated) | 52264.20 Da | ||||||||||||||||||||
| IEP (calculated) | 6.42 | ||||||||||||||||||||
| GRAVY (calculated) | -1.32 | ||||||||||||||||||||
| Length | 453 amino acids | ||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGKWNHRSRH HRRRSPERWY SGRQSSSSSD DGIPVWEKRF CEVIGSVPWQ KVVEAKDFKS WYNGNVITWD DSACEDTFHN EKKRFWSQVN GLHCDVSIPD 101: PDLYISEVDW DTFVDPELIR DLEKAYFAPP DDVNIGFKRG RGDKNWSGCD TVPEARMLET PWKNSDDIIE TGKKSSGWNL TEGSSWEAKP CCVNEKANDT 201: ASGGCLTTEE WRENQWIAKD RVNDSWEYSG QGKDDGWDKS GHQNKKVKGS EEYKKIDNPW EAQPSCIKET AKDTTWGGCS GEGWEDRGWN NDSWGSGGWD 301: NRDLGNQGME MKEWRGKGYS RDFREPKGCN PWKGGFVPDN VAFRESGVNA GGWQTCRGSE TKQINWDVKR ASDGWGRQND NAALREYGAN AGDWQRRRGC 401: EGNQRNWDAK RTGDGWGRQN KERVDSYGYH SNYKNSWPRR DDYQNRKVNF STK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)