AT3G51440.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Calcium-dependent phosphotriesterase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT3G51430.1); Has 1624 Blast hits to 1611 proteins in 398 species: Archae - 36; Bacteria - 672; Metazoa - 222; Fungi - 24; Plants - 455; Viruses - 0; Other Eukaryotes - 215 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:19089114..19090537 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 41385.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.23 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.01 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 371 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPVFLSSRFL FFCIIVPLLI SITLYQLDTF DPAHHPADSL ISSTASIPPL INERFLTGAE FIGVGLLNSP EDIAYHEDSG FIYTGCVDGW VKRVKVAESV 101: NDSLVEDLVN TGGRPLGIAF GIHGEVIVAD AYKGLLNISG DGKKTELLTE EADGVRFKLP DAVTVADNGV LYFTDGSYKY NLHQFSFDIL EGKPHGRLMS 201: FDPTTKVTRV LLRDLYFANG VSLSPDQTHL VFCETPIRRC SKYYINGGRV ELFIQGLPGY PDNIRYDGDG HYWIAMPSGV TTLWKLSMKY PFLRKITAMA 301: AKYGYEPMFM ENAGVLQVDL DGNPIAYYHD QALSHITTGV KIGNYLYCGS LWHSHILRLD LLKYPAQNKK L |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)