AT3G50270.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plastid 0.592 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : HXXXD-type acyl-transferase family protein | ||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G50280.1); Has 2559 Blast hits to 2547 proteins in 184 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 207; Plants - 2350; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr3:+:18635926..18637278 | ||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 49808.50 Da | ||||||||||||||||||||||||||||||||
IEP (calculated) | 6.19 | ||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.02 | ||||||||||||||||||||||||||||||||
Length | 450 amino acids | ||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MAGGGVVLVS SSIVRPVNSS QSGRTKIHLT PFDLSLLQFD YPQRGLLFSK PDSDFHLIIS RLKDSLSLAL EIYFPFAGRL VKTENLEDDT VSFFIDCDGS 101: GARFLHTEAK SVSVSDILQP DGSVPDFLKY FFPADDFKSC DGVSLPLLVI QVTEMKDGVF ISFCYNHMVA DGVSMWSFFD TWSKICSTGS CFNYKPLVLK 201: GWFLEGIDYP IHVPVSEAER SPPSREPSSV PITKEWIFHF TKKNISDLKA KANSEIASSS DLEVSSLQAV SAHMWRSIIR HSGVSREQKT HCRLVVDLRQ 301: RVNPPLEKDC FGNMVYLSSA ITTVEELLDR GLGEAALQIR KLVSSQTNET CKSFAEDWVR NIKNLNSGIG SKVGNTIVIA SSPRFEVYNK DFGWGKPIAI 401: RAGPSNSING KLSVFQGISE GSIDVQAILW GDVIVKLLAD LEFLEHVTIA |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)