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AT3G44370.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain; FUNCTIONS IN: binding; INVOLVED IN: protein insertion into membrane; LOCATED IN: mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Membrane insertion protein, OxaA/YidC (InterPro:IPR001708), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain (TAIR:AT1G65080.1); Has 1410 Blast hits to 1410 proteins in 539 species: Archae - 10; Bacteria - 840; Metazoa - 166; Fungi - 108; Plants - 98; Viruses - 0; Other Eukaryotes - 188 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0706eggNOG:KOG1239EMBL:AK227236EMBL:AL138641
EMBL:BT009724EMBL:CP002686EnsemblPlants:AT3G44370EnsemblPlants:AT3G44370.1
entrez:823562Gene3D:1.25.40.10GeneID:823562Genevisible:Q0WUC5
GO:GO:0005739GO:GO:0005743GO:GO:0016021GO:GO:0051205
Gramene:AT3G44370.1hmmpanther:PTHR12428hmmpanther:PTHR12428:SF22HOGENOM:HOG000033893
InParanoid:Q0WUC5InterPro:IPR001708InterPro:IPR011990InterPro:IPR013026
KEGG:ath:AT3G44370OMA:TSEGITHPANTHER:PTHR12428PaxDb:Q0WUC5
Pfam:PF02096Pfam:PF07719Pfam:PF13181Pfam:Q0WUC5
Pfscan:PS50293PhylomeDB:Q0WUC5PIR:T47426PIR:T47427
PRIDE:Q0WUC5PRO:PR:Q0WUC5PROSITE:PS50293ProteinModelPortal:Q0WUC5
Proteomes:UP000006548RefSeq:NP_190023.2SMR:Q0WUC5STRING:3702.AT3G44370.1
SUPFAM:SSF48452TAIR:AT3G44370TMHMM:TMhelixUniGene:At.36161
UniProt:Q0WUC5
Coordinates (TAIR10) chr3:-:16030515..16035147
Molecular Weight (calculated) 62801.70 Da
IEP (calculated) 6.90
GRAVY (calculated) -0.16
Length 566 amino acids
Sequence (TAIR10)
(BLAST)
001: MAFRRVLLSH LRRSHHTCSS LSPHHVSATT QPSIALALFQ SRFFSTPSDL DSELTRFRDD SIAGVGSNDH GLEFDDSIAS LGSNGHGLEF GDSIGSLGSN
101: GYGLEFGDLS QDLSNYDYLT QPVISLLDSY HDITGLPWWV VIATSTVAFR TALLPILILQ RKQTKRISQF LPKLPHFWPP QGSGRSVLDQ LKLFRKERKD
201: IGCPSFLWVP AYFSIQISCF FLWITSIRRM SLDHHPGFDS GGALWFQNLT EIPNGLYGPL FPFLIAGLHY TNTQITFTAS SVHKVDKFTE LAKAYKTFLN
301: LLTCALYFLS FQMPQGSLLY WATNLSFSIA QQSILNHPVV SAKLGLQAND SVQKEAGNPI LTNINEGKLT DPSSKGRLIS VHNLTPKELV ALSAKYLSGG
401: HKDKSIPLLR LALEKDPEYL QAMIILGQAL YQKDQFAEAA KCLEQAASKL LDTSPTEVEE VDLLIVASQW AGVSNIRQGK TSEGITHLER VANMKEPDDP
501: KSKAHYLDAL VLYSSAIFNE GRREEAAKYL RRVVAYDPSF SELLKQCEED DTIPTSSSSN STSKTS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)