AT3G44370.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:mitochondrion 1.000 ASURE: mitochondrion What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||
Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||
Description (TAIR10) | protein_coding : Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain; FUNCTIONS IN: binding; INVOLVED IN: protein insertion into membrane; LOCATED IN: mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Membrane insertion protein, OxaA/YidC (InterPro:IPR001708), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain (TAIR:AT1G65080.1); Has 1410 Blast hits to 1410 proteins in 539 species: Archae - 10; Bacteria - 840; Metazoa - 166; Fungi - 108; Plants - 98; Viruses - 0; Other Eukaryotes - 188 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||
Coordinates (TAIR10) | chr3:-:16030515..16035147 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 62801.70 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.90 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.16 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 566 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MAFRRVLLSH LRRSHHTCSS LSPHHVSATT QPSIALALFQ SRFFSTPSDL DSELTRFRDD SIAGVGSNDH GLEFDDSIAS LGSNGHGLEF GDSIGSLGSN 101: GYGLEFGDLS QDLSNYDYLT QPVISLLDSY HDITGLPWWV VIATSTVAFR TALLPILILQ RKQTKRISQF LPKLPHFWPP QGSGRSVLDQ LKLFRKERKD 201: IGCPSFLWVP AYFSIQISCF FLWITSIRRM SLDHHPGFDS GGALWFQNLT EIPNGLYGPL FPFLIAGLHY TNTQITFTAS SVHKVDKFTE LAKAYKTFLN 301: LLTCALYFLS FQMPQGSLLY WATNLSFSIA QQSILNHPVV SAKLGLQAND SVQKEAGNPI LTNINEGKLT DPSSKGRLIS VHNLTPKELV ALSAKYLSGG 401: HKDKSIPLLR LALEKDPEYL QAMIILGQAL YQKDQFAEAA KCLEQAASKL LDTSPTEVEE VDLLIVASQW AGVSNIRQGK TSEGITHLER VANMKEPDDP 501: KSKAHYLDAL VLYSSAIFNE GRREEAAKYL RRVVAYDPSF SELLKQCEED DTIPTSSSSN STSKTS |
||||||||||||||||||||||||||||||||||||||||||||||||||||
See Also |
|
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)