AT2G31340.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : embryo defective 1381 | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
embryo defective 1381 (emb1381); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:13361614..13364633 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 64385.20 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 8.20 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.25 | ||||||||||||||||||||||||||||
| Length | 559 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVNKHWKIIP KPLLETVLNN HVQRHRVPQP LILHGPRGVG KTTLILNRLL GDWNKGPHLA GYVDFAQSIT EHHPDHHQSY PWTSWTSVDP PLLSNCKTQL 101: ENCLESMSHK AIKLGSISSQ QIFTTMNKWY GLNTALRRIL QGYNIAVPEK VSVSFLWERA VYALSVRQNA DEIDGLLELE EKGNSLSVEE ASYYRETAFA 201: LRLAKEVIKV HQGWKANAIA HLNRTNGFSR TLANSCTDWP LLMLELLSQA AEIGFFQPKL VLNNIEILKR AIQTDDSTVS ASMYHDNLIW RIIALGANER 301: CLPVLFVTSD SYYSYQAFVD YGFPDIFISR ETFGWNPQEA KLHMVPDYFS ASEWTIIADV LGANSRHLFE LYALKQSNHY QSLMGSKAGT FEDIVDAYLA 401: YLQVAVVNPA MDKALLRLQR YATDVRKGSI PYEKLRFGAS WRHPPQTEDP TQNSEWAKIQ LMDFVQALVN TEFAVNYLGD YSLEIFEDPS AMALVEVGIL 501: YTQRDPSFFR PISQGIKRCL VRWLIQERMQ MSYWSSTKYW WQRIIRGRYY KHLMLGYRT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)