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AT2G26790.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Pentatricopeptide repeat (PPR) superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Pentatricopeptide repeat (PPR) superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G13800.1); Has 52197 Blast hits to 13814 proteins in 285 species: Archae - 9; Bacteria - 44; Metazoa - 475; Fungi - 643; Plants - 49485; Viruses - 2; Other Eukaryotes - 1539 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410Z7Z7eggNOG:KOG4197EMBL:AC005168EMBL:CP002685
EnsemblPlants:AT2G26790EnsemblPlants:AT2G26790.1entrez:817220GeneID:817220
Genevisible:O81028GO:GO:0005739Gramene:AT2G26790.1hmmpanther:PTHR24015
hmmpanther:PTHR24015:SF309HOGENOM:HOG000090566InParanoid:O81028InterPro:IPR002885
iPTMnet:O81028KEGG:ath:AT2G26790OMA:IEMEEIGPaxDb:O81028
Pfam:O81028Pfam:PF01535Pfam:PF12854Pfam:PF13041
Pfscan:PS51375PhylomeDB:O81028PIR:T02656PRIDE:O81028
PRO:PR:O81028PROSITE:PS51375ProteinModelPortal:O81028Proteomes:UP000006548
RefSeq:NP_180247.1SMR:O81028STRING:3702.AT2G26790.1TAIR:AT2G26790
TIGRfam:TIGR00756TIGRFAMs:TIGR00756UniGene:At.66249UniProt:O81028
Coordinates (TAIR10) chr2:-:11425270..11427669
Molecular Weight (calculated) 90365.60 Da
IEP (calculated) 6.19
GRAVY (calculated) -0.00
Length 799 amino acids
Sequence (TAIR10)
(BLAST)
001: MRFSPTFFLL SQLRLTRRRA ATSSRFYAVS ALNNPNNLSD SEQQQVNHLN LSKLTQHGLQ RLLNSTRDDP NLALSFLRQL KEHGVSPNVN AYATLVRILT
101: TWGLDIKLDS VLVELIKNEE RGFTVMDLIE VIGEQAEEKK RSFVLIRVSG ALVKAYVSLG MFDEATDVLF QSKRLDCVVD IKACNFLMNR MTEFGKIGML
201: MTLFKQLKQL GLCANEYTYA IVVKALCRKG NLEEAAMLLI ENESVFGYKT FINGLCVTGE TEKAVALILE LIDRKYLAGD DLRAVLGMVV RGFCNEMKMK
301: AAESVIIEME EIGFGLDVYA CLAVIDRYCK NMNLPEALGF LDKMLGKGLK VNCVIVSLIL QCYCKMDMCL EALEKFKEFR DMNIFLDRVC YNVAFDALSK
401: LGRVEEAFEL LQEMKDRGIV PDVINYTTLI DGYCLQGKVV DALDLIDEMI GNGMSPDLIT YNVLVSGLAR NGHEEEVLEI YERMKAEGPK PNAVTNSVII
501: EGLCFARKVK EAEDFFSSLE QKCPENKASF VKGYCEAGLS KKAYKAFVRL EYPLRKSVYI KLFFSLCIEG YLEKAHDVLK KMSAYRVEPG RSMCGKMIGA
601: FCKLNNVREA QVLFDTMVER GLIPDLFTYT IMIHTYCRLN ELQKAESLFE DMKQRGIKPD VVTYTVLLDR YLKLDPEHHE TCSVQGEVGK RKASEVLREF
701: SAAGIGLDVV CYTVLIDRQC KMNNLEQAAE LFDRMIDSGL EPDMVAYTTL ISSYFRKGYI DMAVTLVTEL SKKYNIPSES FEAAVKSAAL KAKRFQYGE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)