AT3G43790.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.918 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : zinc induced facilitator-like 2 | ||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
zinc induced facilitator-like 2 (ZIFL2); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: zinc induced facilitator-like 1 (TAIR:AT5G13750.1); Has 22616 Blast hits to 21614 proteins in 2597 species: Archae - 368; Bacteria - 16981; Metazoa - 1046; Fungi - 2343; Plants - 376; Viruses - 0; Other Eukaryotes - 1502 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:15655443..15658848 | ||||||||||||
| Molecular Weight (calculated) | 52617.90 Da | ||||||||||||
| IEP (calculated) | 7.87 | ||||||||||||
| GRAVY (calculated) | 0.56 | ||||||||||||
| Length | 478 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MADDESRTIL LEKNEDCPGC IIDRTKQQQR GVPYLHLSFI WLVSLCTALP ISSLFPYIYF MIRDFHIAKQ EEDIGFYAGF VGSSFMIGRA LTSIFWGKLA 101: DRYGRKPIIL IGTFSVIIFN TLFGLSTSFW LAISVRFLLG CFNCLLGVIR AYASEVVSEE YNALSLSVVS TSRGIGLILG PAIGGYLAQP AEKYPNIFSQ 201: SSVFGRFPYF LPSLVISVYA TAVLIACWWL PETLHTRCRI AQGRLNPTEL NDDESRGGGL DEQKIINKPS LLRNRPLMAI IIVYCVFSLQ EIAYNEIFSL 301: WAVSDRSYGG LSFSSQDVGE VLAISGLGLL VFQLLVYPPL EKSVGLLAVI RLSAVLLIPL LSCYPYIALL SGVTLHLVIN CASIIKNALS ISLVTGLFIM 401: LNKAVPQNQR GAANGISMTA MSVFKSFGPA GGGVLFSWAQ KRQDATFLPG DEMVFLVLNL VQLVGLILTF IPYISQIQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)