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AT3G43210.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24134884 (2013): cytoskeleton microtubules
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ATP binding microtubule motor family protein
Curator
Summary (TAIR10)
Encodes a kinesin TETRASPORE. Required for cytokinesis in pollen. In mutants, all four microspore nuclei remain within the same cytoplasm after meiosis.
Computational
Description (TAIR10)
TETRASPORE (TES); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3490 (InterPro:IPR021881), Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT1G18370.1); Has 14242 Blast hits to 13167 proteins in 521 species: Archae - 65; Bacteria - 318; Metazoa - 6487; Fungi - 1661; Plants - 2059; Viruses - 3; Other Eukaryotes - 3649 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-2002-MONOMERBioGrid:8718eggNOG:COG5059eggNOG:KOG0242
EMBL:AB088121EMBL:AJ495781EMBL:AJ496182EMBL:AJ507734
EMBL:AJ508243EMBL:AL353871EMBL:CP002686EnsemblPlants:AT3G43210
EnsemblPlants:AT3G43210.1entrez:823396Gene3D:3.40.850.10GeneID:823396
Genevisible:Q8LNZ2GO:GO:0000911GO:GO:0003777GO:GO:0005524
GO:GO:0005634GO:GO:0005871GO:GO:0005874GO:GO:0007018
GO:GO:0007112GO:GO:0009506GO:GO:0009524GO:GO:0009555
GO:GO:0009558GO:GO:0010245GO:GO:0016887GO:GO:0048229
Gramene:AT3G43210.1hmmpanther:PTHR24115hmmpanther:PTHR24115:SF509HOGENOM:HOG000272678
InParanoid:Q8LNZ2InterPro:IPR001752InterPro:IPR019821InterPro:IPR021881
InterPro:IPR027417InterPro:IPR027640iPTMnet:Q8LNZ2KEGG:ath:AT3G43210
KO:K11498ncoils:CoilOMA:YDLIAWDPANTHER:PTHR24115
PaxDb:Q8LNZ2Pfam:PF00225Pfam:PF11995Pfam:Q8LNZ2
Pfscan:PS50067PhylomeDB:Q8LNZ2PIR:T49235PRIDE:Q8LNZ2
PRINTS:PR00380PRO:PR:Q8LNZ2PROSITE:PS00411PROSITE:PS50067
ProteinModelPortal:Q8LNZ2Proteomes:UP000006548RefSeq:NP_189907.2scanprosite:PS00411
SMART:SM00129SMR:Q8LNZ2STRING:3702.AT3G43210.1SUPFAM:SSF52540
TAIR:AT3G43210tair10-symbols:ATNACK2tair10-symbols:NACK2tair10-symbols:TES
UniGene:At.36305UniProt:Q8LNZ2
Coordinates (TAIR10) chr3:+:15191429..15196021
Molecular Weight (calculated) 106527.00 Da
IEP (calculated) 8.46
GRAVY (calculated) -0.59
Length 938 amino acids
Sequence (TAIR10)
(BLAST)
001: MMGPPRTPLS KIDKSNPYTP CGSKVTEEKI LVTVRMRPLN WREHAKYDLI AWECPDDETI VFKNPNPDKA PTKYSFDKVF EPTCATQEVY EGGSRDVALS
101: ALAGTNATIF AYGQTSSGKT FTMRGVTESV VKDIYEHIRK TQERSFVLKV SALEIYNETV VDLLNRDTGP LRLLDDPEKG TIVENLVEEV VESRQHLQHL
201: ISICEDQRQV GETALNDKSS RSHQIIRLTI HSSLREIAGC VQSFMATLNL VDLAGSERAF QTNADGLRLK EGSHINRSLL TLTTVIRKLS SGRKRDHVPY
301: RDSKLTRILQ NSLGGNARTA IICTISPALS HVEQTKKTLS FAMSAKEVTN CAKVNMVVSE KKLLKHLQQK VAKLESELRS PEPSSSTCLK SLLIEKEMKI
401: QQMESEMKEL KRQRDIAQSE LDLERKAKER KGSSECEPFS QVARCLSYHT KEESIPSKSV PSSRRTARDR RKDNVRQSLT SADPTALVQE IRLLEKHQKK
501: LGEEANQALD LIHKEVTSHK LGDQQAAEKV AKMLSEIRDM QKSNLLTEEI VVGDKANLKE EINRLNSQEI AALEKKLECV QNTIDMLVSS FQTDEQTPDF
601: RTQVKKKRLL PFGLSNSPNL QHMIRGPCSP LSGTENKDPE SNVVSANSAP VSFGATPPKR DDNRCRTQSR EGTPVSRQAN SVDIKRMNRM YKNAAEENIR
701: NIKSYVTGLK ERVAKLQYQK QLLVCQVLEL EANETGAASE YDATDESQMD WPLCFEEQRK QIIMLWHLCH ISIIHRTQFY MLFKGDPADQ IYMEVELRRL
801: TWLEQHLAEL GNASPALLGD EPASYVASSI RALKQEREYL AKRVNTKLGA EEREMLYLKW DVPPVGKQRR QQFINKLWTD PHNMQHVRES AEIVAKLVGF
901: CDSGETIRKE MFELNFASPS DKKTWMMGWN FISNLLHL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)