AT3G28070.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 0.999 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : nodulin MtN21 /EamA-like transporter family protein | ||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
nodulin MtN21 /EamA-like transporter family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT3G28100.1); Has 2821 Blast hits to 2811 proteins in 454 species: Archae - 18; Bacteria - 1312; Metazoa - 7; Fungi - 2; Plants - 1197; Viruses - 0; Other Eukaryotes - 285 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr3:+:10447964..10450845 | ||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 39533.30 Da | ||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 9.79 | ||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.76 | ||||||||||||||||||||||||||||||||||||||||
Length | 360 amino acids | ||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MPIMAGTASP WRREAVFLTA MLVVETSVVG ISTLFKFATS KGLNIYPFLG YSYLLASLLL LPSLFFTNRS SSLPPLSVSI LSKIGLLGFL GSMYVITGYI 101: GIEYSSPTLA SAINNITPAL TFILAIIFRM EKVSFKERSS LAKLMGTILS LIGALVVIFY HGPRVFLASS PPYVNFRQFS PPLSSSNSDW LIGGALLTMQ 201: GIFVSVSFIL QAHIMSVYPA AFRVSFLYTV CVSIVTSTIG LVVEKNNPSV WIIHFDITLI TIVTMAIVTS VYYVIHSWTV RHKGPLYLAI FKPLSILIAV 301: VMGAIFLNDS LYLGCLIGGI LITLGFYAVM WGKANEEKDQ LSFSEKEKTP LLLNRKNDQV |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)