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AT2G03550.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.522
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30783145 (2019): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: carboxyesterase 13 (TAIR:AT3G48700.1); Has 9970 Blast hits to 9948 proteins in 1554 species: Archae - 115; Bacteria - 5525; Metazoa - 1072; Fungi - 910; Plants - 1367; Viruses - 5; Other Eukaryotes - 976 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G03550-MONOMERChEMBL:CHEMBL1932909EC:3.1.1.1eggNOG:COG0657
eggNOG:KOG1515EMBL:AC006284EMBL:BT003917EMBL:BT015034
EMBL:CP002685EnsemblPlants:AT2G03550EnsemblPlants:AT2G03550.1entrez:814884
ESTHER:arath-AT2G03550Gene3D:3.40.50.1820GeneID:814884Genevisible:Q9ZQ91
GO:GO:0052689Gramene:AT2G03550.1hmmpanther:PTHR23024hmmpanther:PTHR23024:SF157
HOGENOM:HOG000152317InParanoid:Q9ZQ91InterPro:IPR013094InterPro:IPR029058
KEGG:ath:AT2G03550MEROPS:S09.A09OMA:SWRVASPPaxDb:Q9ZQ91
Pfam:PF07859Pfam:Q9ZQ91PhylomeDB:Q9ZQ91PIR:G84449
PRIDE:Q9ZQ91PRO:PR:Q9ZQ91ProteinModelPortal:Q9ZQ91Proteomes:UP000006548
RefSeq:NP_178453.1SMR:Q9ZQ91STRING:3702.AT2G03550.1SUPFAM:SSF53474
TAIR:AT2G03550UniGene:At.41385UniProt:Q9ZQ91
Coordinates (TAIR10) chr2:+:1077080..1078018
Molecular Weight (calculated) 34751.70 Da
IEP (calculated) 8.02
GRAVY (calculated) -0.24
Length 312 amino acids
Sequence (TAIR10)
(BLAST)
001: MDSVIAFDRS PMFRVYKSGR IERLLGETTV PPSLTPQNGV VSKDIIHSPE KNLSLRIYLP EKVTVKKLPI LIYFHGGGFI IETAFSPPYH TFLTSAVAAA
101: NCLAISVNYR RAPEFPVPIP YEDSWDSLKW VLTHITGTGP ETWINKHGDF GKVFLAGDSA GGNISHHLTM RAKKEKLCDS LISGIILIHP YFWSKTPIDE
201: FEVRDVGKTK GVEGSWRVAS PNSKQGVDDP WLNVVGSDPS GLGCGRVLVM VAGDDLFVRQ GWCYAEKLKK SGWEGEVEVM ETKNEGHVFH LKNPNSDNAR
301: QVVKKLEEFI NK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)