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AT5G39210.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:24124904 (2013): plastid
  • PMID:18431481 (2008): plastid plastid thylakoid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : chlororespiratory reduction 7
Curator
Summary (TAIR10)
Encodes a protein of the chloroplastic NAD(P)H dehydrogenase complex (NDH Complex) involved in respiration, photosystem I (PSI) cyclic electron transport and CO2 uptake. The product of this gene appears to be essential for the stable formation of the NDH Complex.
Computational
Description (TAIR10)
CHLORORESPIRATORY REDUCTION 7 (CRR7); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: NAD(P)H dehydrogenase complex assembly; LOCATED IN: chloroplast, NAD(P)H dehydrogenase complex (plastoquinone), membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3571 (InterPro:IPR021954); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J075eggNOG:ENOG41100U8EMBL:AB010694EMBL:AY065367
EMBL:AY085734EMBL:AY114028EMBL:CP002688EnsemblPlants:AT5G39210
EnsemblPlants:AT5G39210.1entrez:833917GeneID:833917Genevisible:Q9FL87
GO:GO:0009507GO:GO:0009570GO:GO:0010275GO:GO:0016020
Gramene:AT5G39210.1hmmpanther:PTHR36803InParanoid:Q9FL87InterPro:IPR021954
KEGG:ath:AT5G39210OMA:FLVKAVCPaxDb:Q9FL87Pfam:PF12095
PhylomeDB:Q9FL87PRIDE:Q9FL87PRO:PR:Q9FL87ProteinModelPortal:Q9FL87
Proteomes:UP000006548RefSeq:NP_568563.1SMR:Q9FL87STRING:3702.AT5G39210.1
TAIR:AT5G39210tair10-symbols:CRR7UniGene:At.28515UniProt:Q9FL87
Coordinates (TAIR10) chr5:+:15703231..15703999
Molecular Weight (calculated) 17968.20 Da
IEP (calculated) 6.01
GRAVY (calculated) -0.42
Length 156 amino acids
Sequence (TAIR10)
(BLAST)
001: MECSLQKQLF NNGDKLFSSR HNRRVSIEQV HVTDSLSVNS INLFHKPICY PISSIITSRK SKSHFSVCAT RRRRVHSNSD TYVLLEAGQD EQFVTEDELK
101: AKLRGWLENW PVNSLPPDLA RFDDLDEAVD FLVKAVCELE IDGEVGSVQW YQVRLE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)