AT3G26710.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plastid 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : cofactor assembly of complex C | ||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
cofactor assembly of complex C (CCB1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cytochrome b6f complex assembly; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3529 (InterPro:IPR021919); Has 212 Blast hits to 212 proteins in 63 species: Archae - 0; Bacteria - 77; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr3:+:9813550..9814606 | ||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 30103.10 Da | ||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 10.40 | ||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.03 | ||||||||||||||||||||||||||||||||||||||||
Length | 267 amino acids | ||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MATKLISPPL SCPWVTSREV IIKGLPRRRR EWMVTKRNRV SAVTAMIVEP LSVVSSSAIQ IHQWWEQNPN SLLLMTEATG GYSLASYYTS LGLFVISVPG 101: LWSLIKRSVK SKIVRKTFVV NDVKKEPKQV AGEILSFFTR KNFNITDRGE TITFEGKMVP SRGQAALLTF CTCISLASVG LVLTITVPDF GNNWFFIILL 201: SPLAGVYYWK KASRKEEIKV KMMVGSKGRL DEIVVQGDDV QVEEMRKELQ LNEKGMVYVK GLFERSS |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)