AT3G24630.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; Has 5348 Blast hits to 3182 proteins in 353 species: Archae - 0; Bacteria - 481; Metazoa - 1959; Fungi - 405; Plants - 180; Viruses - 10; Other Eukaryotes - 2313 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:8988398..8990737 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 81079.70 Da | ||||||||||||||||||||||||
| IEP (calculated) | 9.65 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.83 | ||||||||||||||||||||||||
| Length | 724 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPEGKLRSGV YRSFIMCDDP RDVVECGAIK KQSKSRSSST KQRCEEHLSK VKERSEMAVA PRKSSSTEDV PPSSLQLLRV SKGIQKLNVA IESLSKGFSF 101: EAVSRPEDIA KDLLRGALDL EESLAMLSSI QEDDSKRKPM IRNDGRSDLR FQRSMSDRFG ERIEKRMMVQ ENVASKDCYE ELRKVIRESF LRQNLVSQTT 201: TIETKKRVVR SDFASSSGAV SSSTSSSQSS MVSGSTKSSA SSDVPQRAPS LIARLMGLDV STQEPRKSSV NHIDKPDILK LSSERQEKVK KNSKESPEIV 301: RCNSTREAAL QSLPEETPSE NPSTIVLIRP MRVVKPEPGS KQPVVPKKPR MQGEVHPRMI NQRKDHQANG SNKMKLPLRM TKKDKEPKEM VPKVEENEGK 401: VIKLMSPSNA KVLTRDRKPL ETNKKLVVKK DDIAEGKDRH RALKPPSNPV SQKISNNSSD VSRNKSRRSS RLSSSSSSGS REKKSGEASR PNAKKKLRQQ 501: DNDLGSENNS CSSQETHGSL NQLSTEETTS SEFHNQGHCD NGEVSSCAAT IHHSHEPETS QISLKSFLST SSDFISYAED LFDFNTNTER SRESNFRRRD 601: SIVISDQRLA LDFAKEVVRR KSLLLAEPTC HTRSSLDIDE LLTEVCDGFE SLTSYKDTFS GQNSFVKESI HLVLEKDLKG KKTEMTSGVW DLGWRSEFQI 701: DETYEAVADL EKLILSGLIQ EIIS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)