suba logo
AT3G23310.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
nucleus 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26781341 (2016): plasma membrane
  • PMID:18433157 (2008): cytosol
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase, C-terminal (InterPro:IPR017892), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein (TAIR:AT4G14350.3); Has 108657 Blast hits to 107305 proteins in 3549 species: Archae - 122; Bacteria - 13080; Metazoa - 38792; Fungi - 11766; Plants - 25754; Viruses - 427; Other Eukaryotes - 18716 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G23310-MONOMEReggNOG:ENOG410XQC0eggNOG:KOG0605EMBL:AB015474
EMBL:AY063969EMBL:AY096444EMBL:CP002686EnsemblPlants:AT3G23310
EnsemblPlants:AT3G23310.1entrez:821911Gene3D:2.30.29.30GeneID:821911
GO:GO:0004674GO:GO:0005524GO:GO:0005829GO:GO:0005886
GO:GO:0016301Gramene:AT3G23310.1hmmpanther:PTHR24356hmmpanther:PTHR24356:SF212
HOGENOM:HOG000233033IntAct:Q9LW66InterPro:IPR000719InterPro:IPR000961
InterPro:IPR008271InterPro:IPR011009InterPro:IPR011993InterPro:IPR017441
InterPro:IPR017892KEGG:ath:AT3G23310ncoils:CoilOMA:TSHQGSF
Pfam:PF00069Pfam:PF00433Pfscan:PS50011Pfscan:PS51285
PhylomeDB:Q9LW66PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011
PROSITE:PS51285Proteomes:UP000006548RefSeq:NP_188973.2scanprosite:PS00107
scanprosite:PS00108SMART:SM00133SMART:SM00220SMR:Q9LW66
STRING:3702.AT3G23310.1SUPFAM:SSF56112TAIR:AT3G23310UniGene:At.27123
UniProt:Q9LW66
Coordinates (TAIR10) chr3:+:8339799..8343355
Molecular Weight (calculated) 65326.10 Da
IEP (calculated) 8.90
GRAVY (calculated) -0.79
Length 568 amino acids
Sequence (TAIR10)
(BLAST)
001: MDTARAWLKK LKSKGKEKSS NKKETSRGNV KEGSKTAGGE EAVSNVTKQK AAAAKQYIEN HYKKQVQSQQ QRKERRDMLE NKLAAAEVSE EEQKNLLKDL
101: EKKETEYMRR QRHKMGTDDF EPLTMIGKGA FGEVRICREK TTGNVYAMKK LKKSEMLRRG QVEHVKAERN LLAEVDSNCI VKLYCSFQDE EYLYLIMEYL
201: PGGDMMTLLM RKDTLTEDEA RFYVGETVLA IESIHKHNYI HRDIKPDNLL LDRSGHMKLS DFGLCKPLDC SILQEKDFVV AHNLSGALQS DGRPVAPRRT
301: RSQMEQLQNW QRNRRMLAYS TVGTPDYIAP EVLLKKGYGM ECDWWSLGAI MYEMLVGFPP FYSDEPMTTC RKIVNWKNYL KFPDEVRLSP EAKDLICRLL
401: CNVEQRIGTK GANEIKEHPW FSGVEWEKLY QMKAAFIPQV NDELDTQNFE KFEETDKQVP KTPKSGPWRK MLSSKDINFV GYTYKNVEIV NHDQLPGIAE
501: LKKKSTKPKR PSIKSLFEDE SASSTTSHQG SFMKLLPTQI EVPEKEDKSS SSSETLSSST TRFDNATS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)