AT4G14350.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:nucleus 0.978 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, nucleus, plasma membrane, cytoplasm, phragmoplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase, C-terminal (InterPro:IPR017892), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase, catalytic domain (InterPro:IPR000719); BEST Arabidopsis thaliana protein match is: AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein (TAIR:AT3G23310.1); Has 110728 Blast hits to 109370 proteins in 3600 species: Archae - 132; Bacteria - 13769; Metazoa - 39146; Fungi - 11764; Plants - 26526; Viruses - 448; Other Eukaryotes - 18943 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr4:-:8256449..8259934 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 63183.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 8.55 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.74 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 551 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: METAKAWLSK LKSKDKVKSS KKKEATSNVK EGPKTAGGEE ALSNITKEKA AAAKLYIENH YKMQMQSLQE RKERRKMLEK KLAAAEVSEE EQNNLLKDLE 101: MKETEYMRRQ RHKMGADDFE PLTMIGKGAF GEVRICREKG TGNVYAMKKL KKSEMLRRGQ VEHVKAERNL LAEVDSNCIV KLYCSFQDEE YLYLIMEYLP 201: GGDMMTLLMR KDTLTEDEAR FYIGETVLAI ESIHKHNYIH RDIKPDNLLL DKDGHMKLSD FGLCKPLDCS NLQEKDFTVA RNVSGALQSD GRPVATRRTQ 301: QEQLLNWQRN RRMLAYSTVG TPDYIAPEVL LKKGYGMECD WWSLGAIMYE MLVGFPPFYS DDPMTTCRKI VNWRNYLKFP DEVRLSPEAK DLICRLLCNV 401: EQRLGTKGAD EIKGHPWFRG TEWGKLYQMK AAFIPQVNDE LDTQNFEKFE ETDKQVPKSA KSGPWRKMLS SKDINFVGYT YKNVEIVNDD QIPGIAELKK 501: KSNKPKRPSI KSLFEDETSG GTTTHQGSFL NLLPTQIEDP EKEGSKSSSS G |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)