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AT3G21740.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Arabidopsis thaliana protein of unknown function (DUF794)
Curator
Summary (TAIR10)
ACCUMULATION OF PHOTOSYSTEM ONE 4
Computational
Description (TAIR10)
ACCUMULATION OF PHOTOSYSTEM ONE 4 (APO4); INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF794, plant (InterPro:IPR008512); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF794) (TAIR:AT5G57930.2); Has 163 Blast hits to 121 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 163; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IGAEeggNOG:ENOG410YFGIEMBL:BT025884EnsemblPlants:AT3G21740
EnsemblPlants:AT3G21740.1entrez:821728ExpressionAtlas:Q1EC50GeneID:821728
GO:GO:0003723Gramene:AT3G21740.1hmmpanther:PTHR10388hmmpanther:PTHR10388:SF20
InterPro:IPR023342KEGG:ath:AT3G21740OMA:LCGVFKYPaxDb:Q1EC50
Pfam:PF05634Pfam:Q9LSZ0Pfscan:PS51499PhylomeDB:Q1EC50
PRIDE:Q1EC50PROSITE:PS51499RefSeq:NP_188811.2STRING:3702.AT3G21740.1
TAIR:AT3G21740tair10-symbols:APO4UniGene:At.38002UniProt:Q1EC50
UniProt:Q9LSZ0
Coordinates (TAIR10) chr3:-:7662542..7663638
Molecular Weight (calculated) 38545.80 Da
IEP (calculated) 9.61
GRAVY (calculated) -0.34
Length 337 amino acids
Sequence (TAIR10)
(BLAST)
001: MSNWRHKLWR KLSSFQRASY STTSSRNNKL KLDDLRKLRP MILKRIENRA KDYPVKEIVP VAEEILIARK NLISNIAALL KVFPVLTCKF CSEVFVGKEG
101: HLIETCRSYI RRGNNRLHEW VPGSINDILV PVESYHLHNI SQGVIRHQER FDYDRVPAIL ELCCQAGAIH PEEILQYSEI HDNPQISEED IRSLPAGDLK
201: YVGANALMAW EKVRAGVKKL LLVYPSKVCK RCKEVHVGPS GHKARLCGVF KYESWRGTHY WEKAGVNDLV PEKMVWHRRP QDPVVLVDEG RSYYGHAPAI
301: VSLCSHTGAI VPVKYACKMK PQGLSFSFTN PVPNLET
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)