AT3G17750.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G73460.1); Has 90043 Blast hits to 88641 proteins in 3072 species: Archae - 93; Bacteria - 10357; Metazoa - 34146; Fungi - 11944; Plants - 15915; Viruses - 393; Other Eukaryotes - 17195 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:6074228..6078428 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 127246.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.59 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.61 | ||||||||||||||||||||||||||||||||||||
| Length | 1138 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MEDSSSIDSI LEFLRKNHFM RAEAALISEL SKKPSSNGSL QKLNFEDNCV SKLLDKKKQG GSSQALGLHN DSHISDELVV KEIQCGAANN LHESNLMNDV 0101: SVQTQSGNAD FWEERFTFAE GFEDTELDLP PWNHTSTDIV ADSEEYSINP SKRGFVNPRS SKQSSHEKVP EPGKSNKVVV EDVFSSFEKI RTGSSSQVSQ 0201: YDHGKACQSL EVDNKVGNSA IQEGFVTTSW SRSEENIGAS PDHWKDCSVT TVFPLSKGST STKDNGVAIL DKWQGKKLVG ASDSRILIKE QEDDVATALY 0301: LGKSQSGYEH KIPSSLAFSL AHDAPREDLP RLPHVKIKSE DKLMNFTWEE KHERDILDEK LINTDNAFLL GSYLDVPIGQ EINSSGGKMA GGGNWLSVSH 0401: GIADDASDLI FGFGDGLGAL NEHSNEYWDS DEYDDDDDVG YIRQPIEDEA WFLGHEVDYP SDNEKGTEHG SVPDTQDKSQ TKNDDDHSFA EEDSYFSGEQ 0501: YVLAKGIEPV TASNDPMGLS MTETYSTTKQ ADLVARYDGQ LMDAEELSLM DTEPVWKGFV SHENDVILLK KGKVEDNSGR ICRKDIRAED DRNAAVRSIG 0601: VGMSDDVDDN GSIIPEYFPG EGSEWDLELL PYRGVGVAGV KPPPGKGASM LLKNFADGGF SFPSPVADRQ KSQDDSANPE WSNHCDAVVR NESDEPKGLI 0701: QSDSMIVSST KRCSGSSSER NLRDMDDEKV ASSRNSSPSA LSHSSDTGRE HKEEDEEETS HGPEEDPGTS FEDEDAIVVQ EQVRQIQAQE QDFETFNLKI 0801: VHRKNRTGFE EDKNFHVVLN SVIAGRYHVT EHLGSAAFSK AIQAHDLHTG IDVCVKIIKN NKDFFDQSLD EIKLLKYVNQ HDPADKYHLL RLYDYFYFRE 0901: HLLIVCELLK ANLYEFQKFN RESGGEVYFT MPRLQSITIQ CLEALNFLHG LGLIHCDLKP ENILIKSYSR CEIKVIDLGS SCFETDHLCS YVQSRSYRAP 1001: EVILGLPYDK KIDIWSLGCI LAELCTGNVL FQNDSPATLL ARVIGIIGSI DQEMLAKGRD TCKYFTKNHL LYERNQESNN LEYLIPKKSS LRRRLPMGDQ 1101: GFIDFVAYLL QVDPKKRPSA FEALKHPWLT YPYEPISA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)