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AT3G15340.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : proton pump interactor 2
Curator
Summary (TAIR10)
Hypothetical protein similar to PPI1, a protein that interacts with the plasma membrane H+ ATPase AHA1
Computational
Description (TAIR10)
proton pump interactor 2 (PPI2); INVOLVED IN: regulation of proton transport; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G36690.1); Has 26949 Blast hits to 17849 proteins in 1448 species: Archae - 129; Bacteria - 3780; Metazoa - 11316; Fungi - 2383; Plants - 1083; Viruses - 91; Other Eukaryotes - 8167 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JS4IeggNOG:ENOG41119YJEMBL:AP000413EMBL:CP002686
EnsemblPlants:AT3G15340EnsemblPlants:AT3G15340.1entrez:820765GeneID:820765
GO:GO:0005789GO:GO:0005886GO:GO:0010155GO:GO:0016021
hmmpanther:PTHR32219hmmpanther:PTHR32219:SF2HOGENOM:HOG000243080InParanoid:B3H4K7
InterPro:IPR029669KEGG:ath:AT3G15340ncoils:CoilOMA:AFRDDYV
PANTHER:PTHR32219:SF2PaxDb:B3H4K7Pfam:B3H4K7PhylomeDB:B3H4K7
PRIDE:B3H4K7PRO:PR:B3H4K7ProteinModelPortal:B3H4K7Proteomes:UP000006548
RefSeq:NP_001118633.1RefSeq:NP_188152.3TAIR:AT3G15340tair10-symbols:PPI2
TMHMM:TMhelixUniGene:At.50184UniProt:B3H4K7
Coordinates (TAIR10) chr3:-:5160016..5162305
Molecular Weight (calculated) 67327.40 Da
IEP (calculated) 6.81
GRAVY (calculated) -0.82
Length 589 amino acids
Sequence (TAIR10)
(BLAST)
001: MGAQIILSEG FEVVPPPEMN DLVLFGSNQS VSSCDVSTVT TEDGTVFSGD SSPGGATEED FPEEKPFSFY FVKQPAYDDP EIKAKIDEAG HEINRYNKDR
101: IVVSNAQESE KAEILSLFGQ MKSLVSKSEG YRVVIEEKKM EFDALHESLR NLRCSTSDQL CFSKEELDHL IYIAHYQIEH GSIGFEEEDW VLKETEKADG
201: IVLSEDSLAE KEASINRVKS MAVELNEVKK ELDAITWKIN HLSDKVGKSQ NNLRVLDVKK AHILEERDRS YERIKMLRIQ RDKGKAAFYQ SLPVMRKARE
301: LAASGNVRDL EVFASSEADR FMTQWNDDKA FRDDYVKRIS PSLCERQLNQ DGRIKDPEVQ VVWEKKVPVK GGEKVHETNR EDSSSNSSQY GSVITDKRKK
401: ETRKKAMDFN RSSAEESDVT DLEFSVYEKP KKEEEEVDEE TLKEREREEQ LEKARLAMER KRKLQEKAAA KAAIRAQKEA EKKLKECEKK AKKKAAANSS
501: SPSESDHSQE VTKDLEKVRT LAVSGKEKHQ KERSLFPKQR SFRYKHRGRG TEALPKAILN RRKAHKYWVW GLSSAALAVA LFLVVLLLR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)