AT3G10550.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.992 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Myotubularin-like phosphatases II superfamily | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Has 3'-phosphatase activity against both phosphatidylinositol-3,5-bisphosphate (PtdIns3,5P2) and Phosphatidylinositol-3-phosphate (PtdIns3P). The in vitro activity was higher with PtdIns3,5P2 than with PtdIns3P. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Myotubularin-like phosphatases II superfamily; FUNCTIONS IN: phosphatidylinositol-3-phosphatase activity, phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity; INVOLVED IN: dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Myotubularin phosphatase (InterPro:IPR017906), GRAM (InterPro:IPR004182), Myotubularin-related (InterPro:IPR010569); BEST Arabidopsis thaliana protein match is: Myotubularin-like phosphatases II superfamily (TAIR:AT5G04540.1); Has 1697 Blast hits to 1550 proteins in 179 species: Archae - 0; Bacteria - 0; Metazoa - 1273; Fungi - 128; Plants - 40; Viruses - 0; Other Eukaryotes - 256 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:3293210..3298452 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 93383.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.08 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.28 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 840 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTPPRPPSGR VRSLRDYSSE SEKMDGTGSW DTLEWTKLDS TSGSGSFSNL SCLLESERVI VEGYGVVLIN TDEAGTLLVT NFRILFLSEG TRKVIPLGTI 101: PLATIEKFNK MVLKVQSSPR QSDKIPPRRL LQVTGKDMRI IVYGFRPRTK QRRNVFDALL KCTKPERVWD LYTFACGPSK FGNANPKERL LNEYFRLLGK 201: SSIRASMDMI EDGAFTLSNE LWRISDLNSN YNLCQTYPFA FMIPKSISDA ELLQACSFRA RCRLPVITWC QPGSGAVIAR SSQPLVGLMM NMRSNLDEKL 301: VAAFCSQLPG AKGERRKLYI ADARPRKNAL ANGAMGGGSE SSSNYFQSEI VFFGIDNIHA MRESFSRVRD YLDMHGTTSS DGRSSFLRHG GWTWGGGNLS 401: SMSASVSLLG DSGWLIHIQS VLAGAAWIAA RVAMESASVL VHCSDGWDRT TQLVSLACLL LDPYYRTFAG FQALVEKDWL AFGHPFSDRV GMPNISGSGN 501: FDFPRQSSSA GSFPSSPVRQ SSGSAASQSS SSSHGHNNYS PIFMQWIDSV SQLMRMYPCA FEFSPTFLVD FMDCLLSCRF GNFLCNSEKE REQCGIADAC 601: GCLWAYLTDL RSFSATSHVH CNPFYDPLKY DGPLLPPAAS LAPTLWPQFH LRWACPEEAK AADIGVQCRA MTVKYSEMQK EKEAAERRVD EISFAMESLS 701: AELLRERHLS WVARESANRA TKEYAALTRA VQSLGCKINF TTSDVEDDPR SSLENNPRRR NRHGNNSDVS VSISLMPEEN TSGNPKGRVC EALCPLRTRE 801: GVCRWPEVGC AHVGSQFVGL KANFDAFDRL AIYDSYFQPK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)