suba logo
AT3G10540.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
cytosol 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
FP Images

Arabidopsis cell culture (mitochondrial marker)

At3g10540-GFP
(full-length)
mitochondrial marker-RFPoverlay

Images by Sandra Tanz

Arabidopsis cell culture (plastidal marker)

At3g10540-GFP
(full-length)
plastidal marker-RFPoverlay

Images by Sandra Tanz
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : 3-phosphoinositide-dependent protein kinase
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
3-phosphoinositide-dependent protein kinase; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Serine/threonine-protein kinase-1, 3-phosphoinositide dependent (InterPro:IPR015746), Protein kinase, catalytic domain (InterPro:IPR000719), Pleckstrin homology-type (InterPro:IPR011993); BEST Arabidopsis thaliana protein match is: 3'-phosphoinositide-dependent protein kinase 1 (TAIR:AT5G04510.1); Has 127579 Blast hits to 125597 proteins in 4638 species: Archae - 184; Bacteria - 15229; Metazoa - 47076; Fungi - 13122; Plants - 29847; Viruses - 648; Other Eukaryotes - 21473 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G10540-MONOMEREC:2.7.11.1eggNOG:ENOG410XRT8eggNOG:KOG0592
EMBL:AC011560EMBL:AC013428EMBL:AK227816EMBL:BT023428
EMBL:BT025327EMBL:CP002686EnsemblPlants:AT3G10540EnsemblPlants:AT3G10540.1
entrez:820219Gene3D:2.30.29.30GeneID:820219Genevisible:Q4V3C8
GO:GO:0004674GO:GO:0005524GO:GO:0005737GO:GO:0005886
GO:GO:0016301Gramene:AT3G10540.1hmmpanther:PTHR24356hmmpanther:PTHR24356:SF163
HOGENOM:HOG000233026InParanoid:Q4V3C8InterPro:IPR000719InterPro:IPR008271
InterPro:IPR011009InterPro:IPR011993iPTMnet:Q4V3C8KEGG:ath:AT3G10540
KO:K06276ncoils:CoilOMA:QRALQWKPaxDb:Q4V3C8
Pfam:PF00069Pfam:PF14593Pfam:Q4V3C8Pfscan:PS50011
PhylomeDB:Q4V3C8PRIDE:Q4V3C8PRO:PR:Q4V3C8PROSITE:PS00108
PROSITE:PS50011ProteinModelPortal:Q4V3C8Proteomes:UP000006548Reactome:R-ATH-1257604
Reactome:R-ATH-165158Reactome:R-ATH-202424Reactome:R-ATH-2730905Reactome:R-ATH-389357
Reactome:R-ATH-5218920RefSeq:NP_187665.2scanprosite:PS00108SMART:SM00220
SMR:Q4V3C8STRING:3702.AT3G10540.1SUPFAM:SSF50729SUPFAM:SSF56112
TAIR:AT3G10540UniGene:At.39912UniProt:Q4V3C8
Coordinates (TAIR10) chr3:+:3289916..3292429
Molecular Weight (calculated) 54443.70 Da
IEP (calculated) 8.29
GRAVY (calculated) -0.45
Length 486 amino acids
Sequence (TAIR10)
(BLAST)
001: MLTMDKEFDS KLTLQGNSSS NGETISRSKS FAFKAPQENF TYHDFELGKI YGVGSYSKVV RAKKKDNGTV YALKIMDKKF ITKENKTAYV KLERIVLDQL
101: EHPGIVKLFF TFQDTQSLYM ALESCEGGEL FDQITRKGRL SEDEARFYSA EVVDALEYIH NMGLIHRDIK PENLLLTLDG HIKIADFGSV KPMQDSQITV
201: LPNAASDDKA CTFVGTAAYV PPEVLNSSPA TFGNDLWALG CTLYQMLSGT SPFKDASEWL IFQRIIARDI KFPNHFSEAA RDLIDRLLDT DPSRRPGAGS
301: EGYDSLKRHP FFKGVDWKNL RSQTPPKLAP DPASQSASPE RDGSPWNPTH VGDTSVLQND GHNGLSESSG SITRLASIDS FDSRWQQFLE PGESVLMISA
401: VKKLQKITSK KVQLILTNKP RLIYVDPSKL VVKGNIIWSD NSNDLNVQVS SPSHFKICTP KKVLSFEDAK QRALQWKKAI ETLQNR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)