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AT3G10490.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.500
nucleus 0.500
ASURE: cytosol,nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : NAC domain containing protein 52
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Arabidopsis NAC domain containing protein 51 (ANAC051); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, pollen development; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 50 (TAIR:AT3G10480.1); Has 3001 Blast hits to 2994 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3001; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IVQXeggNOG:ENOG41114MPEMBL:CP002686EnsemblPlants:AT3G10490
EnsemblPlants:AT3G10490.1entrez:820213ExpressionAtlas:F4J3T0GeneID:820213
GO:GO:0003677GO:GO:0005634GO:GO:0006351GO:GO:0006355
Gramene:AT3G10490.1hmmpanther:PTHR31989hmmpanther:PTHR31989:SF29InterPro:IPR003441
KEGG:ath:AT3G10490PaxDb:F4J3T0Pfam:PF02365Pfscan:PS51005
PhylomeDB:F4J3T0PRIDE:F4J3T0PROSITE:PS51005ProteinModelPortal:F4J3T0
Proteomes:UP000006548RefSeq:NP_566375.1SMR:F4J3T0STRING:3702.AT3G10490.2
SUPFAM:SSF101941TAIR:AT3G10490tair10-symbols:ANAC051UniGene:At.20993
UniProt:F4J3T0
Coordinates (TAIR10) chr3:+:3268075..3269926
Molecular Weight (calculated) 26950.00 Da
IEP (calculated) 7.74
GRAVY (calculated) -0.52
Length 238 amino acids
Sequence (TAIR10)
(BLAST)
001: MGRESVAVVT APPSATAPGT ASVATSLAPG FRFHPTDEEL VSYYLKRKVL GQPVRFDAIG EVDIYKHEPW DLAVFSRLKT RDQEWYFYSA LDKKYGNGAR
101: MNRATNRGYW KATGKDREIR RDILLLGMKK TLVFHSGRAP DGLRTNWVMH EYRLVEYETE KNGNLVQDAY VLCRVFHKNN IGPPSGNRYA PFMEEEWADD
201: EGALIPGIDV KLRLEPPPVA NGNDQMDQII YASSGVHL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)