AT3G05190.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.722 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT5G27410.2); Has 12987 Blast hits to 12984 proteins in 2156 species: Archae - 154; Bacteria - 7776; Metazoa - 19; Fungi - 96; Plants - 317; Viruses - 0; Other Eukaryotes - 4625 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:1471457..1475067 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 62215.70 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.88 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.28 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 555 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAEPEVIHSW SAPRSLSTSL MYSFAQRLDT EVVDEPLYAS FLKATGFDRP YRDEVLSKME CNGEKVVKDV IYGSGSKKYR YCKHISKQRL FGLPSELMSR 101: GKHFILIRNP LNILPSFEKV HPPSFLELGL GELVSIYSDL CQMGTPPAVI DADELQRDPE TTLRGLCDDL EIPFQASMLK WKAGPIPEDG VWAPWWYKSV 201: HESTGFSSPK KYPRTFPLSH YDLLERSLPL YNILRSHVKH SSSLLSSPLP PPSLPVPENA KLLAWVGDEI LPREMAKVSV FDSVVQGGDS VWEGLRIYKG 301: KIFKLEEHLD RLFDSAKALA FDNVPAREEV KEAIFRTLIT NGMFDNTHIR LSLTRGKKVT SGMSPAYNRY GCTLIVLAEW KPPVYDNEGG IVLVTATTRR 401: NSPNNLDSKI HHNNLLNNIL AKIESNNTNA ADAIMLDKDG YVSETNATNI FMVKKGCVLT PHADYCLPGI TRATVMELVV KENFILEERR ISLSEFHTAN 501: EVWTTGTMGE LSPVVKIDGR VIGDGKVGPV TRTLQNAYKK LTEDSGVPIP TYQEP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)