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AT3G04980.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : DNAJ heat shock N-terminal domain-containing protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G27240.1); Has 24150 Blast hits to 22364 proteins in 3226 species: Archae - 156; Bacteria - 8554; Metazoa - 5064; Fungi - 2027; Plants - 2674; Viruses - 40; Other Eukaryotes - 5635 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J1QWeggNOG:ENOG410YNE6EMBL:AC009465EMBL:CP002686
EnsemblPlants:AT3G04980EnsemblPlants:AT3G04980.1entrez:819658Gene3D:1.10.287.110
GeneID:819658Gramene:AT3G04980.1hmmpanther:PTHR24078hmmpanther:PTHR24078:SF181
HOGENOM:HOG000243864InterPro:IPR001623InterPro:IPR024593KEGG:ath:AT3G04980
ncoils:CoilOMA:GYKANENPfam:PF00226Pfam:PF11926
Pfscan:PS50076PhylomeDB:Q9CAW2PRINTS:PR00625PROSITE:PS50076
Proteomes:UP000006548RefSeq:NP_187149.1SMART:SM00271SMR:Q9CAW2
SUPFAM:SSF46565TAIR:AT3G04980UniGene:At.65063UniProt:Q9CAW2
Coordinates (TAIR10) chr3:-:1378684..1382181
Molecular Weight (calculated) 129910.00 Da
IEP (calculated) 9.73
GRAVY (calculated) -0.87
Length 1165 amino acids
Sequence (TAIR10)
(BLAST)
0001: MEAGDFVGAH KFVTKAQRLF PNLENIVQMM TICDVHSSAI KKIKGLDDWY GVLQVQPYAD ADTIKKQYRK LALLLHPDKN KFAGAEAAFK LVGEANRLLS
0101: DQIKRSQYDN RYRSHSMFAN RHVNVYSGRH CAATNNAAEN IAGVFTFWTR CRHCGQCYKY LREYMNTSMH CSSCQKSFVA CKMRCDGVPP SSSTAGRKEF
0201: QDQVMSNTSR QNASTAAESG SSAADMGKNG KVGGKVNKKN QEKQKNGAVN RGTKKEEGCT ENDAEGRKPQ TSETGTNISA EMPKADVLKP QHQVKEEPDT
0301: SAEKSIPDLS APQKNRAPKK KRKVVEESSK SFEVDSSDTA GAKTDTNEHN KRKSSRKKPQ VSYAKEGSDG DFVSPPNKKT KSGFEFESEP NKKQTAEDNK
0401: SPKLAVSGVS SASSHSYKGK AKKNAHSGNE DNLSAKNKVS EGCDGNGEDA ALLSKIGRVE KGYKANENSN PLDIPDLEFS VFKVERKTED FAVNQVWSTT
0501: TDCRDGMPRK YARVKKVLNG EFKLRITYLD PVLDKTDESI PVACGKFKNG KTMEVKDSSI FSGQMHHLRC NNIVSIYPRK GEIWAIFREW EEEWNTSLKK
0601: HKFPYKYDFV EIVSDFHDLN GVGVAYLGKL KGSVQLFHWE PQHGICQIQC SPKDMLRFSH KVPAVKMTGK EKESVPPNSY ELDPAALPKD IFQVDAVDME
0701: MDSEILKGKA DGPYKVGAKA KAVQETASSP RKRQKSDDDN DDGVCSNLGE VIGGSNRSHI FSSCEVDDKN TSTKSRKDGE STDVFRLRKS PRLQTIPNHQ
0801: GDEKKSAKQG NKMNTPKKMD KGLVTDSLGV DEKKTSKSRK NGEATDVFKL RKSPRLQTIP SQQGDEMKST KQGNKMNTPK KTDKGLETDS LGVRKSPNGI
0901: HQPAESQEGE SSKKQGCNGE IPSLSKQNDL PTQLGGSTYK SPRTTHVSPH CKTPRRNAFD FQNLRSEDKF EVNQIWAIYS NDNGMPLEYV KIKKIETKPK
1001: FVLRGTPTEL YPPSTEPVTR TVSCGEFKLL KGRPKIIPHA SFSHLVKPFD SSKRFRFKVY PRKGEIWALY KNCDSTEEPD IVEVVEDNCD GEIVKVVALT
1101: AMGSSFQRKQ GSDVGLIDIS KAEMSRFSHQ IPAIRHPKKT TRLVKGGYYW ELDPIAIPSR TIVID
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)