AT3G04830.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 0.532 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein prenylyltransferase superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein prenylyltransferase superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat-containing (InterPro:IPR013026); BEST Arabidopsis thaliana protein match is: Protein prenylyltransferase superfamily protein (TAIR:AT5G28220.1); Has 554 Blast hits to 546 proteins in 223 species: Archae - 33; Bacteria - 51; Metazoa - 210; Fungi - 111; Plants - 58; Viruses - 0; Other Eukaryotes - 91 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:1326289..1329132 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 33747.10 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.33 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.17 | ||||||||||||||||||||||||||||||||||||
| Length | 303 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVTKTEEIQL NQLENQVENG GGGVWEYLCL VRKLKVRRSE IVLKHGLSIL NDSGKRSALG PDEWTLYEQV AIAAMDCQSL GVAQNCIKVL KKKFPESKRV 101: GKLEALLLEA KGMWEEAEKA YTSLLEDNPL DQVIHKRKVA MAKAQGKSSL AIEHLNKYLE VFMADHDAWR ELAEIYVSLQ MYKQAAFCYE ELILTQPTLP 201: LYHLAYADVL YTIGGLENLI AARKYYAATI DLTGGKSTRA LLGICLCGSA IAQISKGRNK EDKDMAAPEL QSLAATALER EYKQKAPAKL NLLTSALRNL 301: KIA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)