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AT3G04320.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Kunitz family trypsin and protease inhibitor protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Kunitz family trypsin and protease inhibitor protein; FUNCTIONS IN: endopeptidase inhibitor activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I3, Kunitz legume (InterPro:IPR002160), Kunitz inhibitor ST1-like (InterPro:IPR011065); BEST Arabidopsis thaliana protein match is: Kunitz family trypsin and protease inhibitor protein (TAIR:AT3G04330.1); Has 157 Blast hits to 157 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 157; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JXQ6eggNOG:ENOG41103SGEMBL:AK229498EMBL:CP002686
EnsemblPlants:AT3G04320EnsemblPlants:AT3G04320.1entrez:819587GeneID:819587
GO:GO:0004866GO:GO:0008233Gramene:AT3G04320.1hmmpanther:PTHR33107
hmmpanther:PTHR33107:SF5InterPro:IPR002160InterPro:IPR011065KEGG:ath:AT3G04320
MEROPS:I03.017OMA:TISMTNDPfam:PF00197PROSITE:PS00283
Proteomes:UP000006548RefSeq:NP_187082.2scanprosite:PS00283SMART:SM00452
SMR:Q0WNE5STRING:3702.AT3G04320.1SUPFAM:SSF50386TAIR:AT3G04320
UniGene:At.40856UniProt:Q0WNE5
Coordinates (TAIR10) chr3:+:1143815..1144426
Molecular Weight (calculated) 22933.40 Da
IEP (calculated) 7.42
GRAVY (calculated) -0.31
Length 203 amino acids
Sequence (TAIR10)
(BLAST)
001: MKTFQLMMIS FLFVAITTTS GVVSEGNDVV YDGEGDPVKP NVPYYISFMT SDYNMWICRM QYGSTDPNSC PQQPLMVTHP NLAAPTPVMF VLANKSDVVR
101: ESAKLKIKFV GPRQCGKSGF WKVVQRNSSE GEVFLNGSKS MSHNDSTFAI HKTNEYYKFT FGDGDYPTTI SMTNDYPIYR LLSKRLSGEM EIYFYKNLTT
201: SEG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)