suba logo
AT3G03900.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
cytosol 0.906
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : adenosine-5'-phosphosulfate (APS) kinase 3
Curator
Summary (TAIR10)
Provides activated sulfate for the sulfation of secondary metabolites, including the glucosinolates. Redundant with APK4.
Computational
Description (TAIR10)
adenosine-5'-phosphosulfate (APS) kinase 3 (APK3); FUNCTIONS IN: transferase activity, transferring phosphorus-containing groups, kinase activity, ATP binding; INVOLVED IN: male gamete generation, sulfate assimilation; LOCATED IN: cytosol; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Adenylylsulphate kinase, C-terminal (InterPro:IPR002891); BEST Arabidopsis thaliana protein match is: APS kinase (TAIR:AT2G14750.1); Has 5006 Blast hits to 5006 proteins in 1478 species: Archae - 56; Bacteria - 2976; Metazoa - 240; Fungi - 284; Plants - 130; Viruses - 2; Other Eukaryotes - 1318 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G03900-MONOMEREC:2.7.1.25eggNOG:COG0529eggNOG:KOG0635
EMBL:AC009540EMBL:AC011698EMBL:CP002686EnsemblPlants:AT3G03900
EnsemblPlants:AT3G03900.1entrez:821077Gene3D:3.40.50.300GeneID:821077
Genevisible:Q9SRW7GO:GO:0000103GO:GO:0004020GO:GO:0005524
GO:GO:0005829GO:GO:0019344GO:GO:0070814Gramene:AT3G03900.1
gramene_pathway:2.7.1.25gramene_pathway:PWY-5340HAMAP:MF_00065hmmpanther:PTHR11055
hmmpanther:PTHR11055:SF22HOGENOM:HOG000228204InParanoid:Q9SRW7InterPro:IPR002891
InterPro:IPR027417KEGG:00230+2.7.1.25KEGG:00920+2.7.1.25KEGG:ath:AT3G03900
KO:K00860OMA:CEIELKEPaxDb:Q9SRW7Pfam:PF01583
Pfam:Q9SRW7PhylomeDB:Q9SRW7PRIDE:Q9SRW7PRO:PR:Q9SRW7
ProteinModelPortal:Q9SRW7Proteomes:UP000006548Reactome:R-ATH-174362RefSeq:NP_187040.1
SMR:Q9SRW7STRING:3702.AT3G03900.1SUPFAM:SSF52540TAIR:AT3G03900
tair10-symbols:APK3TIGRfam:TIGR00455TIGRFAMs:TIGR00455UniGene:At.53172
UniPathway:UPA00140UniProt:Q9SRW7
Coordinates (TAIR10) chr3:-:1002975..1004271
Molecular Weight (calculated) 23147.80 Da
IEP (calculated) 5.46
GRAVY (calculated) -0.38
Length 208 amino acids
Sequence (TAIR10)
(BLAST)
001: MSTVGNSTNI FWQESPIGKT ERQKLLNQKG CVVWITGLSG SGKSTLACSL SRELNNRGKL SYILDGDNLR HGLNKDLGFK AEDRVENIRR VGEVAKLFAD
101: AGLICIASLI SPYRKDRDAC REMIQNSSFI EVFMNMSLQL CEARDPKGLY KLARAGKIKG FTGIDDPYES PLNCEIELKE KEGECPSPVA MAEEVISYLE
201: DKGFLQNE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)