AT3G03350.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 0.655 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : NAD(P)-binding Rossmann-fold superfamily protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: metabolic process; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G03330.1); Has 56644 Blast hits to 56586 proteins in 3128 species: Archae - 370; Bacteria - 40229; Metazoa - 3300; Fungi - 2140; Plants - 1046; Viruses - 2; Other Eukaryotes - 9557 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:791273..794553 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 31568.60 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 8.87 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.31 | ||||||||||||||||||||||||||||
| Length | 288 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MFLVLHYLTN QTNSDSYLGG HTGITTPLRP PPPRKTYCSK SSSSPPPPKY MYVTGVPGEL YRTEPDDQWG YNSSVNRNLV YLVLKLELNF RDQRNKLTQE 101: VSSAFSGKLN ILNNLRTILP HFYQLRLPAP EEIASLVAFL CLPAASYTTR QEELKACLND CKSSGLVVSG SKSKASDASE ETINTTFDIN VFGTITLIKL 201: VTPHMLKQGG GHFVVISSAA GKVPSPGQAI YSASKHALHG YFHSLRSEFC QEGIKVTVVI PGPIETLNGT GTSTSEDKKS HEKRVSSE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)