AT3G02320.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : N2,N2-dimethylguanosine tRNA methyltransferase | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
N2,N2-dimethylguanosine tRNA methyltransferase; FUNCTIONS IN: RNA binding, tRNA (guanine-N2-)-methyltransferase activity; INVOLVED IN: tRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: N2,N2-dimethylguanosine tRNA methyltransferase (InterPro:IPR002905); BEST Arabidopsis thaliana protein match is: N2,N2-dimethylguanosine tRNA methyltransferase (TAIR:AT5G15810.1); Has 1019 Blast hits to 973 proteins in 363 species: Archae - 257; Bacteria - 68; Metazoa - 198; Fungi - 156; Plants - 105; Viruses - 0; Other Eukaryotes - 235 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:470097..473492 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 65607.20 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.78 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.47 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 589 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: METDLNDYTV IKEGEAEILM HKKNQVFFNK AQVNNRDMSI AVLREFLSKR KQEHEAKSSK RTRPASKVIE KDASEASKEE TPSENGMNNG DHEVASEDGP 101: SSVSKDPAKT TERFAPREPK PPKVLEALSA SGLRALRYAR EIEGIGQVVA LDNDLASVEA CQRNIKFNGS VAISKVESHH TDARVHMLTH PKEFDVVDLD 201: PYGSPSIFLD SAIQSVTDGG LLMCTATDMA VLCGGNGEVC YSKYGSYPLR AKYCHEMALR ILLASIESHA NRYKRYIVPV LSVQMDFYVR VFVRVYTSAS 301: AMKNTPLKLS YVYQCIGCDS FHLQPVGRSL PKNNSVRYLP AIGPVVKQDC NHCGKKYNMG GPIWSAPMHD PEWVTSILNS VKSMKDRYPA YDRISAVLTT 401: VSEELLDVPL FLSLHNLCAT LKCISPSAAM FRSAVINANY RISGTHVNPL GMKTDAPMEV IWDIMRCWVK NHPIKAQSPE QPGSVILSKE PSHEVDFSRH 501: IGSLSKAQAK KVARFLPNPE KHWGPKLRAG RQITSKHVSL IGHEAVNGHL SQHHEELKEE DEEAEPEDNV QDKVDPKRQK TATDNITST |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)