AT5G15810.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.980 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : N2,N2-dimethylguanosine tRNA methyltransferase | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
N2,N2-dimethylguanosine tRNA methyltransferase; FUNCTIONS IN: RNA binding, tRNA (guanine-N2-)-methyltransferase activity; INVOLVED IN: tRNA processing; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: N2,N2-dimethylguanosine tRNA methyltransferase (InterPro:IPR002905); BEST Arabidopsis thaliana protein match is: N2,N2-dimethylguanosine tRNA methyltransferase (TAIR:AT3G02320.1); Has 1017 Blast hits to 963 proteins in 359 species: Archae - 255; Bacteria - 70; Metazoa - 198; Fungi - 150; Plants - 103; Viruses - 0; Other Eukaryotes - 241 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:5157798..5161121 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 77004.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.21 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.41 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 691 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNFSKRFVGF KQLSILRYSL PNPYGLFRVS PLCLSETATK LEAIGFIQAS LKPVAKFRHL YSHIYRFKLC DLPFGFQIRV GNSISESSAP KEKNLRSAME 101: TDLNDYTVIK EGEAEVLMHK KNQVFFNKAQ VNNRDMSIAV LRAFIIKRKQ EHEAMLSKRA RSSGKVVEKD VSETSKEETP TENGDDNGKT NGEHEVTTQD 201: GPKEAAKTAY ESARRELKPP RVLEALSASG LRALRYAREV EGIGQVVALD NDPASVEACQ RNIKFNGLMS TSKVESHLTD ARVHMLSHPK DFDVVDLDPY 301: GAPSIFLDSA VQSVADGGLL MCTATDMAVL CGANGEVCYS KYGSYPLKGK YCHEMALRIL LASIESHANR YKRYIVPVLS VQMDFYVRVF VRVYTSASAM 401: KNTPLKLSYV YQCIGCDSFH LQSVGRSLPK NNSVRYLPGV GPVVPQDCTH CGKKYNMGGP IWSAPIHDQE WVNSILNGVK SMKDRYPAYD RICAVLTTIS 501: EELPDVPLFL SLHSLSATLK CTSPSAALFR SAVINAKYRV SGSHVNPLGI KTDAPMEIIW DIMRCWVKNH PIKPQSPEHP GSVILSKEPS HQADFSRHVG 601: SLSKAQAKKV ARFLPNPEKH WGPKIRAGRT ITSKHVSLLG HEAVNGHLNN NHKEAGDEEE EEEEEEPEED IIEGEPELKR QKTTEDFAST S |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)